Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Rpap1Q80TE0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Rpap1Q80TE0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC33.15■■■□□ 2.9
Rpap1Q80TE0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rpap1Q80TE0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rpap1Q80TE0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Rpap1Q80TE0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Rpap1Q80TE0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC33.13■■■□□ 2.89
Rpap1Q80TE0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rpap1Q80TE0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Rpap1Q80TE0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rpap1Q80TE0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Rpap1Q80TE0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
Rpap1Q80TE0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Gm10657-201ENSMUST00000193528 1031 ntBASIC33.11■■■□□ 2.89
Rpap1Q80TE0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Gm8493-201ENSMUST00000196881 489 ntBASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Rpap1Q80TE0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Rpap1Q80TE0 Gm43173-201ENSMUST00000202246 593 ntBASIC33.09■■■□□ 2.89
Rpap1Q80TE0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Rpap1Q80TE0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Rpap1Q80TE0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Rpap1Q80TE0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC33.08■■■□□ 2.89
Rpap1Q80TE0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Rpap1Q80TE0 Gm12251-201ENSMUST00000117893 792 ntBASIC33.08■■■□□ 2.89
Rpap1Q80TE0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Rpap1Q80TE0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Rpap1Q80TE0 Gm5874-201ENSMUST00000096101 508 ntBASIC33.07■■■□□ 2.88
Rpap1Q80TE0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Rpap1Q80TE0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Rpap1Q80TE0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Rpap1Q80TE0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC33.05■■■□□ 2.88
Rpap1Q80TE0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC33.04■■■□□ 2.88
Rpap1Q80TE0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
Rpap1Q80TE0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Gm8770-201ENSMUST00000121113 1109 ntBASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rpap1Q80TE0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Wdr70-203ENSMUST00000227371 1130 ntBASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Rpap1Q80TE0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.88
Rpap1Q80TE0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Rpap1Q80TE0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC33■■■□□ 2.87
Rpap1Q80TE0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Rpap1Q80TE0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC33■■■□□ 2.87
Rpap1Q80TE0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Gm7143-201ENSMUST00000222811 859 ntBASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
Rpap1Q80TE0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC32.98■■■□□ 2.87
Rpap1Q80TE0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC32.98■■■□□ 2.87
Rpap1Q80TE0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC32.98■■■□□ 2.87
Rpap1Q80TE0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC32.98■■■□□ 2.87
Rpap1Q80TE0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC32.97■■■□□ 2.87
Rpap1Q80TE0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Rpap1Q80TE0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Rpap1Q80TE0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Rpap1Q80TE0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Rpap1Q80TE0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC32.96■■■□□ 2.87
Rpap1Q80TE0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC32.95■■■□□ 2.87
Rpap1Q80TE0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC32.95■■■□□ 2.87
Rpap1Q80TE0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Rpap1Q80TE0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Gm5576-201ENSMUST00000075809 1236 ntBASIC32.94■■■□□ 2.86
Rpap1Q80TE0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC32.93■■■□□ 2.86
Rpap1Q80TE0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms