Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.26■□□□□ 0.67
Pif1Q80SX8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.21■□□□□ 0.67
Pif1Q80SX8 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.21■□□□□ 0.67
Pif1Q80SX8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pif1Q80SX8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pif1Q80SX8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Pif1Q80SX8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.18■□□□□ 0.66
Pif1Q80SX8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pif1Q80SX8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pif1Q80SX8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pif1Q80SX8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pif1Q80SX8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pif1Q80SX8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.16■□□□□ 0.66
Pif1Q80SX8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pif1Q80SX8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.14■□□□□ 0.65
Pif1Q80SX8 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 153.6 ms