Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx4Q7TNK1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx4Q7TNK1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Rfx4Q7TNK1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx4Q7TNK1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Rfx4Q7TNK1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx4Q7TNK1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx4Q7TNK1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx4Q7TNK1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx4Q7TNK1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx4Q7TNK1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rfx4Q7TNK1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx4Q7TNK1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx4Q7TNK1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx4Q7TNK1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx4Q7TNK1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx4Q7TNK1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Rfx4Q7TNK1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfx4Q7TNK1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rfx4Q7TNK1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfx4Q7TNK1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rfx4Q7TNK1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rfx4Q7TNK1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx4Q7TNK1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.98■□□□□ 0.79
Rfx4Q7TNK1 Gm7432-201ENSMUST00000210343 879 ntBASIC19.98■□□□□ 0.79
Rfx4Q7TNK1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Rfx4Q7TNK1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx4Q7TNK1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfx4Q7TNK1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfx4Q7TNK1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx4Q7TNK1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Rfx4Q7TNK1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx4Q7TNK1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx4Q7TNK1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Rfx4Q7TNK1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx4Q7TNK1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfx4Q7TNK1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rfx4Q7TNK1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx4Q7TNK1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx4Q7TNK1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx4Q7TNK1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rfx4Q7TNK1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.94■□□□□ 0.78
Rfx4Q7TNK1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
Rfx4Q7TNK1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx4Q7TNK1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rfx4Q7TNK1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx4Q7TNK1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx4Q7TNK1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx4Q7TNK1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Rfx4Q7TNK1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx4Q7TNK1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rfx4Q7TNK1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx4Q7TNK1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx4Q7TNK1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx4Q7TNK1 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.93■□□□□ 0.78
Rfx4Q7TNK1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx4Q7TNK1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx4Q7TNK1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx4Q7TNK1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rfx4Q7TNK1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx4Q7TNK1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rfx4Q7TNK1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx4Q7TNK1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx4Q7TNK1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx4Q7TNK1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx4Q7TNK1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx4Q7TNK1 Gm11599-201ENSMUST00000118720 878 ntBASIC19.91■□□□□ 0.78
Rfx4Q7TNK1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx4Q7TNK1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms