Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox11Q7M6Y2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Sox11Q7M6Y2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox11Q7M6Y2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sox11Q7M6Y2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sox11Q7M6Y2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox11Q7M6Y2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox11Q7M6Y2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox11Q7M6Y2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox11Q7M6Y2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox11Q7M6Y2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.21■□□□□ 0.99
Sox11Q7M6Y2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.21■□□□□ 0.99
Sox11Q7M6Y2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sox11Q7M6Y2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox11Q7M6Y2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox11Q7M6Y2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox11Q7M6Y2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox11Q7M6Y2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.19■□□□□ 0.98
Sox11Q7M6Y2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox11Q7M6Y2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sox11Q7M6Y2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox11Q7M6Y2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sox11Q7M6Y2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox11Q7M6Y2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
Sox11Q7M6Y2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox11Q7M6Y2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox11Q7M6Y2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox11Q7M6Y2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Gm6139-201ENSMUST00000079261 882 ntBASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox11Q7M6Y2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sox11Q7M6Y2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sox11Q7M6Y2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.14■□□□□ 0.97
Sox11Q7M6Y2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Sox11Q7M6Y2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox11Q7M6Y2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sox11Q7M6Y2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.13■□□□□ 0.97
Sox11Q7M6Y2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Sox11Q7M6Y2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Sox11Q7M6Y2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Sox11Q7M6Y2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox11Q7M6Y2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox11Q7M6Y2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox11Q7M6Y2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox11Q7M6Y2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox11Q7M6Y2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox11Q7M6Y2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox11Q7M6Y2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox11Q7M6Y2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox11Q7M6Y2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox11Q7M6Y2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.1■□□□□ 0.97
Sox11Q7M6Y2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms