Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vma21Q78T54 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vma21Q78T54 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vma21Q78T54 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vma21Q78T54 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vma21Q78T54 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.97■□□□□ 0.31
Vma21Q78T54 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Vma21Q78T54 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vma21Q78T54 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vma21Q78T54 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vma21Q78T54 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vma21Q78T54 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vma21Q78T54 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vma21Q78T54 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vma21Q78T54 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vma21Q78T54 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vma21Q78T54 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Vma21Q78T54 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vma21Q78T54 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vma21Q78T54 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Vma21Q78T54 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vma21Q78T54 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
Vma21Q78T54 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Vma21Q78T54 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.95■□□□□ 0.3
Vma21Q78T54 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.95■□□□□ 0.3
Vma21Q78T54 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vma21Q78T54 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Vma21Q78T54 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vma21Q78T54 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vma21Q78T54 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vma21Q78T54 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Vma21Q78T54 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.94■□□□□ 0.3
Vma21Q78T54 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vma21Q78T54 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.94■□□□□ 0.3
Vma21Q78T54 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vma21Q78T54 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vma21Q78T54 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vma21Q78T54 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vma21Q78T54 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Vma21Q78T54 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vma21Q78T54 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Vma21Q78T54 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.93■□□□□ 0.3
Vma21Q78T54 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vma21Q78T54 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vma21Q78T54 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.92■□□□□ 0.3
Vma21Q78T54 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.92■□□□□ 0.3
Vma21Q78T54 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vma21Q78T54 Gm27502-201ENSMUST00000183495 199 ntBASIC16.92■□□□□ 0.3
Vma21Q78T54 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.92■□□□□ 0.3
Vma21Q78T54 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vma21Q78T54 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vma21Q78T54 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vma21Q78T54 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vma21Q78T54 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.91■□□□□ 0.3
Vma21Q78T54 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.91■□□□□ 0.3
Vma21Q78T54 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vma21Q78T54 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vma21Q78T54 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vma21Q78T54 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Vma21Q78T54 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vma21Q78T54 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vma21Q78T54 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vma21Q78T54 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vma21Q78T54 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vma21Q78T54 Gm14523-201ENSMUST00000117260 558 ntBASIC16.9■□□□□ 0.3
Vma21Q78T54 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.9■□□□□ 0.3
Vma21Q78T54 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vma21Q78T54 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vma21Q78T54 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.9■□□□□ 0.3
Vma21Q78T54 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vma21Q78T54 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vma21Q78T54 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vma21Q78T54 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.89■□□□□ 0.29
Vma21Q78T54 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vma21Q78T54 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vma21Q78T54 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vma21Q78T54 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vma21Q78T54 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vma21Q78T54 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.88■□□□□ 0.29
Vma21Q78T54 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vma21Q78T54 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vma21Q78T54 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vma21Q78T54 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vma21Q78T54 Gm7332-201ENSMUST00000118351 454 ntBASIC16.88■□□□□ 0.29
Vma21Q78T54 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.88■□□□□ 0.29
Vma21Q78T54 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vma21Q78T54 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms