Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.12■■□□□ 1.29
Kdm1aQ6ZQ88 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Kdm1aQ6ZQ88 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.12■■□□□ 1.29
Kdm1aQ6ZQ88 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Kdm1aQ6ZQ88 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Kdm1aQ6ZQ88 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Kdm1aQ6ZQ88 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Kdm1aQ6ZQ88 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Kdm1aQ6ZQ88 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Kdm1aQ6ZQ88 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.11■■□□□ 1.29
Kdm1aQ6ZQ88 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Kdm1aQ6ZQ88 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Kdm1aQ6ZQ88 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Kdm1aQ6ZQ88 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Kdm1aQ6ZQ88 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Kdm1aQ6ZQ88 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Kdm1aQ6ZQ88 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Kdm1aQ6ZQ88 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Kdm1aQ6ZQ88 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Kdm1aQ6ZQ88 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.08■■□□□ 1.29
Kdm1aQ6ZQ88 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.08■■□□□ 1.29
Kdm1aQ6ZQ88 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Kdm1aQ6ZQ88 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.08■■□□□ 1.29
Kdm1aQ6ZQ88 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Kdm1aQ6ZQ88 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Kdm1aQ6ZQ88 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Kdm1aQ6ZQ88 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.08■■□□□ 1.29
Kdm1aQ6ZQ88 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Kdm1aQ6ZQ88 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Kdm1aQ6ZQ88 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
Kdm1aQ6ZQ88 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Kdm1aQ6ZQ88 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Kdm1aQ6ZQ88 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Kdm1aQ6ZQ88 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.07■■□□□ 1.28
Kdm1aQ6ZQ88 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Kdm1aQ6ZQ88 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Kdm1aQ6ZQ88 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Kdm1aQ6ZQ88 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Kdm1aQ6ZQ88 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Kdm1aQ6ZQ88 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Kdm1aQ6ZQ88 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Kdm1aQ6ZQ88 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Kdm1aQ6ZQ88 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Kdm1aQ6ZQ88 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Kdm1aQ6ZQ88 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Kdm1aQ6ZQ88 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.05■■□□□ 1.28
Kdm1aQ6ZQ88 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.05■■□□□ 1.28
Kdm1aQ6ZQ88 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Kdm1aQ6ZQ88 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Kdm1aQ6ZQ88 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Kdm1aQ6ZQ88 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Kdm1aQ6ZQ88 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Kdm1aQ6ZQ88 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Kdm1aQ6ZQ88 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.04■■□□□ 1.28
Kdm1aQ6ZQ88 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Kdm1aQ6ZQ88 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Kdm1aQ6ZQ88 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Kdm1aQ6ZQ88 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Kdm1aQ6ZQ88 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Kdm1aQ6ZQ88 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.03■■□□□ 1.28
Kdm1aQ6ZQ88 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Kdm1aQ6ZQ88 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Kdm1aQ6ZQ88 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Kdm1aQ6ZQ88 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Kdm1aQ6ZQ88 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Kdm1aQ6ZQ88 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Kdm1aQ6ZQ88 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Kdm1aQ6ZQ88 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Kdm1aQ6ZQ88 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.01■■□□□ 1.27
Kdm1aQ6ZQ88 Gm45444-201ENSMUST00000211394 898 ntBASIC23.01■■□□□ 1.27
Kdm1aQ6ZQ88 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Kdm1aQ6ZQ88 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Kdm1aQ6ZQ88 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Kdm1aQ6ZQ88 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
Kdm1aQ6ZQ88 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Kdm1aQ6ZQ88 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23■■□□□ 1.27
Kdm1aQ6ZQ88 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23■■□□□ 1.27
Kdm1aQ6ZQ88 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Kdm1aQ6ZQ88 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Kdm1aQ6ZQ88 Gm5913-201ENSMUST00000119397 1399 ntBASIC23■■□□□ 1.27
Kdm1aQ6ZQ88 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms