Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.49■□□□□ 0.71
Timd4Q6U7R4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Timd4Q6U7R4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Timd4Q6U7R4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.48■□□□□ 0.71
Timd4Q6U7R4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Timd4Q6U7R4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Timd4Q6U7R4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.47■□□□□ 0.71
Timd4Q6U7R4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Timd4Q6U7R4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Timd4Q6U7R4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Timd4Q6U7R4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Timd4Q6U7R4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Timd4Q6U7R4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.46■□□□□ 0.71
Timd4Q6U7R4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Timd4Q6U7R4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Timd4Q6U7R4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Timd4Q6U7R4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.44■□□□□ 0.7
Timd4Q6U7R4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Timd4Q6U7R4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.44■□□□□ 0.7
Timd4Q6U7R4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Timd4Q6U7R4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Timd4Q6U7R4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Timd4Q6U7R4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Timd4Q6U7R4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.43■□□□□ 0.7
Timd4Q6U7R4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.43■□□□□ 0.7
Timd4Q6U7R4 Gm9959-201ENSMUST00000068277 390 ntBASIC19.43■□□□□ 0.7
Timd4Q6U7R4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Timd4Q6U7R4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Timd4Q6U7R4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Timd4Q6U7R4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Timd4Q6U7R4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Timd4Q6U7R4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Timd4Q6U7R4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Timd4Q6U7R4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.41■□□□□ 0.7
Timd4Q6U7R4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Timd4Q6U7R4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Timd4Q6U7R4 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.41■□□□□ 0.7
Timd4Q6U7R4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Timd4Q6U7R4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Timd4Q6U7R4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Timd4Q6U7R4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Timd4Q6U7R4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Timd4Q6U7R4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Timd4Q6U7R4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.39■□□□□ 0.69
Timd4Q6U7R4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.39■□□□□ 0.69
Timd4Q6U7R4 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.39■□□□□ 0.69
Timd4Q6U7R4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Timd4Q6U7R4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Timd4Q6U7R4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Timd4Q6U7R4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Timd4Q6U7R4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Timd4Q6U7R4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Timd4Q6U7R4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Timd4Q6U7R4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Timd4Q6U7R4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.38■□□□□ 0.69
Timd4Q6U7R4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Timd4Q6U7R4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Timd4Q6U7R4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Timd4Q6U7R4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Timd4Q6U7R4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Timd4Q6U7R4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.37■□□□□ 0.69
Timd4Q6U7R4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Timd4Q6U7R4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Timd4Q6U7R4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Timd4Q6U7R4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Timd4Q6U7R4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Timd4Q6U7R4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Timd4Q6U7R4 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.37■□□□□ 0.69
Timd4Q6U7R4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Timd4Q6U7R4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms