Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.02■□□□□ 0.47
Col7a1Q63870 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col7a1Q63870 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.02■□□□□ 0.47
Col7a1Q63870 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.01■□□□□ 0.47
Col7a1Q63870 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col7a1Q63870 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col7a1Q63870 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.01■□□□□ 0.47
Col7a1Q63870 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.01■□□□□ 0.47
Col7a1Q63870 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18■□□□□ 0.47
Col7a1Q63870 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col7a1Q63870 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col7a1Q63870 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18■□□□□ 0.47
Col7a1Q63870 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col7a1Q63870 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18■□□□□ 0.47
Col7a1Q63870 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col7a1Q63870 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Col7a1Q63870 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col7a1Q63870 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col7a1Q63870 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Col7a1Q63870 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col7a1Q63870 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col7a1Q63870 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col7a1Q63870 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col7a1Q63870 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col7a1Q63870 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col7a1Q63870 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.99■□□□□ 0.47
Col7a1Q63870 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Col7a1Q63870 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col7a1Q63870 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col7a1Q63870 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col7a1Q63870 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col7a1Q63870 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col7a1Q63870 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col7a1Q63870 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.97■□□□□ 0.47
Col7a1Q63870 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col7a1Q63870 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col7a1Q63870 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.97■□□□□ 0.47
Col7a1Q63870 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.97■□□□□ 0.47
Col7a1Q63870 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col7a1Q63870 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.96■□□□□ 0.47
Col7a1Q63870 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
Col7a1Q63870 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.96■□□□□ 0.47
Col7a1Q63870 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col7a1Q63870 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.96■□□□□ 0.47
Col7a1Q63870 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col7a1Q63870 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.95■□□□□ 0.46
Col7a1Q63870 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col7a1Q63870 Gm9870-201ENSMUST00000063874 645 ntBASIC17.95■□□□□ 0.46
Col7a1Q63870 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col7a1Q63870 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Col7a1Q63870 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col7a1Q63870 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.95■□□□□ 0.46
Col7a1Q63870 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col7a1Q63870 Gm40848-201ENSMUST00000221998 324 ntBASIC17.94■□□□□ 0.46
Col7a1Q63870 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col7a1Q63870 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col7a1Q63870 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col7a1Q63870 Gm22240-201ENSMUST00000175225 82 ntBASIC17.94■□□□□ 0.46
Col7a1Q63870 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col7a1Q63870 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col7a1Q63870 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Col7a1Q63870 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col7a1Q63870 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col7a1Q63870 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col7a1Q63870 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col7a1Q63870 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col7a1Q63870 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col7a1Q63870 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col7a1Q63870 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col7a1Q63870 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Col7a1Q63870 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.91■□□□□ 0.46
Col7a1Q63870 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.91■□□□□ 0.46
Col7a1Q63870 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col7a1Q63870 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col7a1Q63870 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Col7a1Q63870 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Col7a1Q63870 Gm12527-201ENSMUST00000117967 564 ntBASIC17.91■□□□□ 0.46
Col7a1Q63870 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.91■□□□□ 0.46
Col7a1Q63870 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.91■□□□□ 0.46
Col7a1Q63870 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col7a1Q63870 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Col7a1Q63870 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col7a1Q63870 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col7a1Q63870 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col7a1Q63870 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col7a1Q63870 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Col7a1Q63870 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.9■□□□□ 0.46
Col7a1Q63870 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Col7a1Q63870 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Col7a1Q63870 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.89■□□□□ 0.46
Col7a1Q63870 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Col7a1Q63870 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col7a1Q63870 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.89■□□□□ 0.45
Col7a1Q63870 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Col7a1Q63870 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.89■□□□□ 0.45
Col7a1Q63870 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Col7a1Q63870 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.88■□□□□ 0.45
Col7a1Q63870 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col7a1Q63870 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col7a1Q63870 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms