Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Six3Q62233 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Six3Q62233 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Six3Q62233 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.42■□□□□ 0.86
Six3Q62233 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six3Q62233 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six3Q62233 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Six3Q62233 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six3Q62233 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.42■□□□□ 0.86
Six3Q62233 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six3Q62233 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six3Q62233 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.41■□□□□ 0.86
Six3Q62233 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Six3Q62233 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six3Q62233 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.41■□□□□ 0.86
Six3Q62233 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six3Q62233 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six3Q62233 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six3Q62233 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.4■□□□□ 0.86
Six3Q62233 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six3Q62233 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six3Q62233 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six3Q62233 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Six3Q62233 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Six3Q62233 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six3Q62233 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Six3Q62233 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Six3Q62233 Cap2-205ENSMUST00000225824 1634 ntBASIC20.38■□□□□ 0.85
Six3Q62233 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six3Q62233 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Six3Q62233 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.37■□□□□ 0.85
Six3Q62233 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.37■□□□□ 0.85
Six3Q62233 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.37■□□□□ 0.85
Six3Q62233 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six3Q62233 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six3Q62233 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six3Q62233 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six3Q62233 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six3Q62233 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Six3Q62233 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six3Q62233 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six3Q62233 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Six3Q62233 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.36■□□□□ 0.85
Six3Q62233 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six3Q62233 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Six3Q62233 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six3Q62233 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six3Q62233 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six3Q62233 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Six3Q62233 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Six3Q62233 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.35■□□□□ 0.85
Six3Q62233 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Six3Q62233 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.35■□□□□ 0.85
Six3Q62233 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six3Q62233 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six3Q62233 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six3Q62233 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six3Q62233 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six3Q62233 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Six3Q62233 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Six3Q62233 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Six3Q62233 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Six3Q62233 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six3Q62233 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Six3Q62233 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Six3Q62233 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.33■□□□□ 0.85
Six3Q62233 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six3Q62233 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Six3Q62233 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.33■□□□□ 0.85
Six3Q62233 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six3Q62233 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.33■□□□□ 0.85
Six3Q62233 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Six3Q62233 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Six3Q62233 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Six3Q62233 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Six3Q62233 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Six3Q62233 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six3Q62233 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six3Q62233 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.32■□□□□ 0.84
Six3Q62233 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six3Q62233 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six3Q62233 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Six3Q62233 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Six3Q62233 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Six3Q62233 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.31■□□□□ 0.84
Six3Q62233 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six3Q62233 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.31■□□□□ 0.84
Six3Q62233 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.31■□□□□ 0.84
Six3Q62233 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Six3Q62233 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six3Q62233 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six3Q62233 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six3Q62233 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six3Q62233 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six3Q62233 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Six3Q62233 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six3Q62233 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.3■□□□□ 0.84
Six3Q62233 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six3Q62233 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Six3Q62233 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms