Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Itm2aQ61500 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Itm2aQ61500 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Itm2aQ61500 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.56■□□□□ 0.88
Itm2aQ61500 Gm9806-201ENSMUST00000051080 552 ntBASIC20.56■□□□□ 0.88
Itm2aQ61500 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Itm2aQ61500 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.56■□□□□ 0.88
Itm2aQ61500 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Itm2aQ61500 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.55■□□□□ 0.88
Itm2aQ61500 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Itm2aQ61500 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Itm2aQ61500 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Itm2aQ61500 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Itm2aQ61500 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Itm2aQ61500 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Itm2aQ61500 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Itm2aQ61500 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Itm2aQ61500 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Itm2aQ61500 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Itm2aQ61500 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itm2aQ61500 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itm2aQ61500 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itm2aQ61500 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itm2aQ61500 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itm2aQ61500 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.54■□□□□ 0.88
Itm2aQ61500 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itm2aQ61500 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itm2aQ61500 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Itm2aQ61500 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Itm2aQ61500 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Itm2aQ61500 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Itm2aQ61500 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Itm2aQ61500 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Itm2aQ61500 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Itm2aQ61500 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Itm2aQ61500 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Itm2aQ61500 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.52■□□□□ 0.88
Itm2aQ61500 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Itm2aQ61500 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Itm2aQ61500 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Itm2aQ61500 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.51■□□□□ 0.87
Itm2aQ61500 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Itm2aQ61500 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Itm2aQ61500 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Itm2aQ61500 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.51■□□□□ 0.87
Itm2aQ61500 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Itm2aQ61500 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itm2aQ61500 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itm2aQ61500 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itm2aQ61500 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itm2aQ61500 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Itm2aQ61500 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itm2aQ61500 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itm2aQ61500 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Itm2aQ61500 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itm2aQ61500 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itm2aQ61500 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Itm2aQ61500 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itm2aQ61500 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Itm2aQ61500 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Itm2aQ61500 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itm2aQ61500 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.49■□□□□ 0.87
Itm2aQ61500 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Itm2aQ61500 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Itm2aQ61500 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Itm2aQ61500 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Itm2aQ61500 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Itm2aQ61500 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Itm2aQ61500 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Itm2aQ61500 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Itm2aQ61500 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Itm2aQ61500 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itm2aQ61500 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itm2aQ61500 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itm2aQ61500 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itm2aQ61500 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Itm2aQ61500 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itm2aQ61500 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.46■□□□□ 0.87
Itm2aQ61500 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.46■□□□□ 0.87
Itm2aQ61500 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itm2aQ61500 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Itm2aQ61500 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itm2aQ61500 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.46■□□□□ 0.87
Itm2aQ61500 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itm2aQ61500 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itm2aQ61500 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Itm2aQ61500 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Itm2aQ61500 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Itm2aQ61500 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.45■□□□□ 0.86
Itm2aQ61500 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Itm2aQ61500 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Itm2aQ61500 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Itm2aQ61500 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Itm2aQ61500 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Itm2aQ61500 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itm2aQ61500 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Itm2aQ61500 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Itm2aQ61500 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itm2aQ61500 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itm2aQ61500 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms