Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox17Q61473 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox17Q61473 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Sox17Q61473 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox17Q61473 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox17Q61473 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox17Q61473 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox17Q61473 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sox17Q61473 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.59■□□□□ 0.73
Sox17Q61473 Gm7432-201ENSMUST00000210343 879 ntBASIC19.59■□□□□ 0.73
Sox17Q61473 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox17Q61473 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox17Q61473 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox17Q61473 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sox17Q61473 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox17Q61473 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox17Q61473 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox17Q61473 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Sox17Q61473 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.58■□□□□ 0.73
Sox17Q61473 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox17Q61473 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox17Q61473 Gm44428-201ENSMUST00000204474 874 ntBASIC19.58■□□□□ 0.72
Sox17Q61473 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox17Q61473 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sox17Q61473 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sox17Q61473 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox17Q61473 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sox17Q61473 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Sox17Q61473 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sox17Q61473 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.57■□□□□ 0.72
Sox17Q61473 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sox17Q61473 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox17Q61473 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox17Q61473 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox17Q61473 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox17Q61473 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox17Q61473 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox17Q61473 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Sox17Q61473 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Sox17Q61473 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox17Q61473 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Sox17Q61473 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox17Q61473 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox17Q61473 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sox17Q61473 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox17Q61473 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox17Q61473 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox17Q61473 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sox17Q61473 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Sox17Q61473 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Sox17Q61473 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Sox17Q61473 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sox17Q61473 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.54■□□□□ 0.72
Sox17Q61473 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox17Q61473 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox17Q61473 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.54■□□□□ 0.72
Sox17Q61473 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox17Q61473 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sox17Q61473 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox17Q61473 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox17Q61473 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.54■□□□□ 0.72
Sox17Q61473 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox17Q61473 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox17Q61473 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox17Q61473 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox17Q61473 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox17Q61473 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.53■□□□□ 0.72
Sox17Q61473 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox17Q61473 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Sox17Q61473 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox17Q61473 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox17Q61473 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox17Q61473 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox17Q61473 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox17Q61473 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox17Q61473 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.52■□□□□ 0.71
Sox17Q61473 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sox17Q61473 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox17Q61473 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox17Q61473 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox17Q61473 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox17Q61473 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.51■□□□□ 0.71
Sox17Q61473 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox17Q61473 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox17Q61473 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sox17Q61473 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox17Q61473 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox17Q61473 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox17Q61473 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms