Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfaip3Q60769 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Tnfaip3Q60769 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfaip3Q60769 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfaip3Q60769 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfaip3Q60769 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.66■□□□□ 0.74
Tnfaip3Q60769 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfaip3Q60769 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Tnfaip3Q60769 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tnfaip3Q60769 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfaip3Q60769 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.64■□□□□ 0.73
Tnfaip3Q60769 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfaip3Q60769 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfaip3Q60769 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfaip3Q60769 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfaip3Q60769 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfaip3Q60769 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfaip3Q60769 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfaip3Q60769 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tnfaip3Q60769 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfaip3Q60769 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.62■□□□□ 0.73
Tnfaip3Q60769 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfaip3Q60769 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfaip3Q60769 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfaip3Q60769 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfaip3Q60769 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tnfaip3Q60769 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfaip3Q60769 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tnfaip3Q60769 Gm22238-201ENSMUST00000175222 88 ntBASIC19.61■□□□□ 0.73
Tnfaip3Q60769 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tnfaip3Q60769 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfaip3Q60769 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfaip3Q60769 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfaip3Q60769 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.6■□□□□ 0.73
Tnfaip3Q60769 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfaip3Q60769 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfaip3Q60769 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfaip3Q60769 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfaip3Q60769 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Tnfaip3Q60769 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfaip3Q60769 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfaip3Q60769 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfaip3Q60769 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.59■□□□□ 0.73
Tnfaip3Q60769 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Tnfaip3Q60769 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Tnfaip3Q60769 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfaip3Q60769 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfaip3Q60769 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfaip3Q60769 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfaip3Q60769 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfaip3Q60769 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfaip3Q60769 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Tnfaip3Q60769 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfaip3Q60769 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Tnfaip3Q60769 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfaip3Q60769 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tnfaip3Q60769 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.56■□□□□ 0.72
Tnfaip3Q60769 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfaip3Q60769 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.56■□□□□ 0.72
Tnfaip3Q60769 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfaip3Q60769 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Tnfaip3Q60769 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms