Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ClpbQ60649 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20■□□□□ 0.79
ClpbQ60649 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ClpbQ60649 Rps24-207ENSMUST00000224568 714 ntBASIC20■□□□□ 0.79
ClpbQ60649 Nsd1-206ENSMUST00000224918 1001 ntBASIC20■□□□□ 0.79
ClpbQ60649 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ClpbQ60649 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ClpbQ60649 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ClpbQ60649 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClpbQ60649 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ClpbQ60649 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ClpbQ60649 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ClpbQ60649 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ClpbQ60649 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ClpbQ60649 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ClpbQ60649 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ClpbQ60649 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ClpbQ60649 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ClpbQ60649 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.97■□□□□ 0.79
ClpbQ60649 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ClpbQ60649 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ClpbQ60649 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ClpbQ60649 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ClpbQ60649 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.96■□□□□ 0.79
ClpbQ60649 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
ClpbQ60649 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ClpbQ60649 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ClpbQ60649 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ClpbQ60649 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ClpbQ60649 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ClpbQ60649 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClpbQ60649 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClpbQ60649 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ClpbQ60649 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
ClpbQ60649 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClpbQ60649 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClpbQ60649 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ClpbQ60649 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClpbQ60649 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClpbQ60649 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.94■□□□□ 0.78
ClpbQ60649 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClpbQ60649 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.94■□□□□ 0.78
ClpbQ60649 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClpbQ60649 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClpbQ60649 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClpbQ60649 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClpbQ60649 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClpbQ60649 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClpbQ60649 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ClpbQ60649 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.93■□□□□ 0.78
ClpbQ60649 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.93■□□□□ 0.78
ClpbQ60649 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClpbQ60649 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClpbQ60649 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClpbQ60649 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.92■□□□□ 0.78
ClpbQ60649 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClpbQ60649 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClpbQ60649 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClpbQ60649 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClpbQ60649 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.91■□□□□ 0.78
ClpbQ60649 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ClpbQ60649 Gm45102-201ENSMUST00000207427 857 ntBASIC19.91■□□□□ 0.78
ClpbQ60649 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.91■□□□□ 0.78
ClpbQ60649 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ClpbQ60649 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClpbQ60649 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.9■□□□□ 0.78
ClpbQ60649 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClpbQ60649 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.9■□□□□ 0.78
ClpbQ60649 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClpbQ60649 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClpbQ60649 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClpbQ60649 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ClpbQ60649 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ClpbQ60649 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ClpbQ60649 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ClpbQ60649 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ClpbQ60649 Gm9959-201ENSMUST00000068277 390 ntBASIC19.89■□□□□ 0.77
ClpbQ60649 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ClpbQ60649 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.88■□□□□ 0.77
ClpbQ60649 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpbQ60649 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpbQ60649 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpbQ60649 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpbQ60649 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ClpbQ60649 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpbQ60649 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpbQ60649 Gm14117-201ENSMUST00000122417 843 ntBASIC19.88■□□□□ 0.77
ClpbQ60649 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.88■□□□□ 0.77
ClpbQ60649 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms