Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps13aQ5H8C4 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.28■■□□□ 1
Vps13aQ5H8C4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Vps13aQ5H8C4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps13aQ5H8C4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.28■■□□□ 1
Vps13aQ5H8C4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.28■■□□□ 1
Vps13aQ5H8C4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Vps13aQ5H8C4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vps13aQ5H8C4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.27■■□□□ 1
Vps13aQ5H8C4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.27■■□□□ 1
Vps13aQ5H8C4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps13aQ5H8C4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps13aQ5H8C4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.27■■□□□ 1
Vps13aQ5H8C4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Vps13aQ5H8C4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps13aQ5H8C4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps13aQ5H8C4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vps13aQ5H8C4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps13aQ5H8C4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.26■□□□□ 0.99
Vps13aQ5H8C4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps13aQ5H8C4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vps13aQ5H8C4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vps13aQ5H8C4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps13aQ5H8C4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps13aQ5H8C4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.24■□□□□ 0.99
Vps13aQ5H8C4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps13aQ5H8C4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps13aQ5H8C4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps13aQ5H8C4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps13aQ5H8C4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.23■□□□□ 0.99
Vps13aQ5H8C4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps13aQ5H8C4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps13aQ5H8C4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps13aQ5H8C4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Vps13aQ5H8C4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps13aQ5H8C4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Vps13aQ5H8C4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vps13aQ5H8C4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vps13aQ5H8C4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps13aQ5H8C4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Vps13aQ5H8C4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps13aQ5H8C4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps13aQ5H8C4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps13aQ5H8C4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps13aQ5H8C4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps13aQ5H8C4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.21■□□□□ 0.99
Vps13aQ5H8C4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Vps13aQ5H8C4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
Vps13aQ5H8C4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Vps13aQ5H8C4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps13aQ5H8C4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vps13aQ5H8C4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps13aQ5H8C4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps13aQ5H8C4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Vps13aQ5H8C4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps13aQ5H8C4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.19■□□□□ 0.98
Vps13aQ5H8C4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Vps13aQ5H8C4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps13aQ5H8C4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps13aQ5H8C4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Vps13aQ5H8C4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps13aQ5H8C4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps13aQ5H8C4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vps13aQ5H8C4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps13aQ5H8C4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps13aQ5H8C4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps13aQ5H8C4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps13aQ5H8C4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.17■□□□□ 0.98
Vps13aQ5H8C4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps13aQ5H8C4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.17■□□□□ 0.98
Vps13aQ5H8C4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps13aQ5H8C4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps13aQ5H8C4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps13aQ5H8C4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps13aQ5H8C4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Vps13aQ5H8C4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps13aQ5H8C4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps13aQ5H8C4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vps13aQ5H8C4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vps13aQ5H8C4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.15■□□□□ 0.98
Vps13aQ5H8C4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.15■□□□□ 0.98
Vps13aQ5H8C4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vps13aQ5H8C4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.15■□□□□ 0.98
Vps13aQ5H8C4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps13aQ5H8C4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vps13aQ5H8C4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
Vps13aQ5H8C4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.14■□□□□ 0.98
Vps13aQ5H8C4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.14■□□□□ 0.98
Vps13aQ5H8C4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Vps13aQ5H8C4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.14■□□□□ 0.98
Vps13aQ5H8C4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vps13aQ5H8C4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vps13aQ5H8C4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps13aQ5H8C4 Gm43060-201ENSMUST00000200621 289 ntBASIC21.14■□□□□ 0.97
Vps13aQ5H8C4 Gm10033-202ENSMUST00000211874 928 ntBASIC21.14■□□□□ 0.97
Vps13aQ5H8C4 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.13■□□□□ 0.97
Vps13aQ5H8C4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps13aQ5H8C4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.13■□□□□ 0.97
Vps13aQ5H8C4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.13■□□□□ 0.97
Vps13aQ5H8C4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms