Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtl6Q505G4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtl6Q505G4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtl6Q505G4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtl6Q505G4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtl6Q505G4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.77■□□□□ 0.43
Rtl6Q505G4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl6Q505G4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.76■□□□□ 0.43
Rtl6Q505G4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl6Q505G4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl6Q505G4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl6Q505G4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl6Q505G4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.75■□□□□ 0.43
Rtl6Q505G4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.75■□□□□ 0.43
Rtl6Q505G4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl6Q505G4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl6Q505G4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl6Q505G4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rtl6Q505G4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl6Q505G4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl6Q505G4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl6Q505G4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl6Q505G4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.74■□□□□ 0.43
Rtl6Q505G4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.74■□□□□ 0.43
Rtl6Q505G4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.74■□□□□ 0.43
Rtl6Q505G4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl6Q505G4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rtl6Q505G4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl6Q505G4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Rtl6Q505G4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rtl6Q505G4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl6Q505G4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl6Q505G4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl6Q505G4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rtl6Q505G4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl6Q505G4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl6Q505G4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl6Q505G4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rtl6Q505G4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtl6Q505G4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl6Q505G4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl6Q505G4 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.72■□□□□ 0.43
Rtl6Q505G4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Gm40881-201ENSMUST00000223397 166 ntBASIC17.71■□□□□ 0.43
Rtl6Q505G4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.71■□□□□ 0.43
Rtl6Q505G4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl6Q505G4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl6Q505G4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl6Q505G4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.7■□□□□ 0.42
Rtl6Q505G4 Gm10399-202ENSMUST00000202768 748 ntBASIC17.7■□□□□ 0.42
Rtl6Q505G4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl6Q505G4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtl6Q505G4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl6Q505G4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Gm7417-201ENSMUST00000192950 473 ntBASIC17.69■□□□□ 0.42
Rtl6Q505G4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rtl6Q505G4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl6Q505G4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl6Q505G4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.68■□□□□ 0.42
Rtl6Q505G4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl6Q505G4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl6Q505G4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl6Q505G4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rtl6Q505G4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl6Q505G4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl6Q505G4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl6Q505G4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Rtl6Q505G4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.67■□□□□ 0.42
Rtl6Q505G4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Rtl6Q505G4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.67■□□□□ 0.42
Rtl6Q505G4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl6Q505G4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.67■□□□□ 0.42
Rtl6Q505G4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms