Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm7160-202ENSMUST00000188519 1027 ntBASIC37.83■■■■□ 3.65
Pds5bQ4VA53 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC37.81■■■■□ 3.64
Pds5bQ4VA53 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC37.81■■■■□ 3.64
Pds5bQ4VA53 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
Pds5bQ4VA53 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
Pds5bQ4VA53 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC37.8■■■■□ 3.64
Pds5bQ4VA53 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC37.8■■■■□ 3.64
Pds5bQ4VA53 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC37.79■■■■□ 3.64
Pds5bQ4VA53 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC37.79■■■■□ 3.64
Pds5bQ4VA53 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Pds5bQ4VA53 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC37.78■■■■□ 3.64
Pds5bQ4VA53 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC37.78■■■■□ 3.64
Pds5bQ4VA53 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Pds5bQ4VA53 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC37.78■■■■□ 3.64
Pds5bQ4VA53 AV356131-201ENSMUST00000206201 750 ntBASIC37.77■■■■□ 3.64
Pds5bQ4VA53 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
Pds5bQ4VA53 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC37.76■■■■□ 3.64
Pds5bQ4VA53 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC37.76■■■■□ 3.63
Pds5bQ4VA53 Gm18671-201ENSMUST00000214826 683 ntBASIC37.76■■■■□ 3.63
Pds5bQ4VA53 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC37.76■■■■□ 3.63
Pds5bQ4VA53 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC37.75■■■■□ 3.63
Pds5bQ4VA53 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Pds5bQ4VA53 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Pds5bQ4VA53 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
Pds5bQ4VA53 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC37.75■■■■□ 3.63
Pds5bQ4VA53 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC37.74■■■■□ 3.63
Pds5bQ4VA53 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC37.74■■■■□ 3.63
Pds5bQ4VA53 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Pds5bQ4VA53 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC37.74■■■■□ 3.63
Pds5bQ4VA53 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Pds5bQ4VA53 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Pds5bQ4VA53 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Pds5bQ4VA53 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC37.72■■■■□ 3.63
Pds5bQ4VA53 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
Pds5bQ4VA53 Gm40848-201ENSMUST00000221998 324 ntBASIC37.71■■■■□ 3.63
Pds5bQ4VA53 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
Pds5bQ4VA53 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC37.7■■■■□ 3.63
Pds5bQ4VA53 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC37.7■■■■□ 3.63
Pds5bQ4VA53 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC37.7■■■■□ 3.63
Pds5bQ4VA53 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC37.7■■■■□ 3.63
Pds5bQ4VA53 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC37.7■■■■□ 3.63
Pds5bQ4VA53 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
Pds5bQ4VA53 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC37.69■■■■□ 3.62
Pds5bQ4VA53 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
Pds5bQ4VA53 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC37.69■■■■□ 3.62
Pds5bQ4VA53 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
Pds5bQ4VA53 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC37.69■■■■□ 3.62
Pds5bQ4VA53 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC37.69■■■■□ 3.62
Pds5bQ4VA53 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
Pds5bQ4VA53 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Pds5bQ4VA53 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC37.68■■■■□ 3.62
Pds5bQ4VA53 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
Pds5bQ4VA53 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC37.68■■■■□ 3.62
Pds5bQ4VA53 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC37.67■■■■□ 3.62
Pds5bQ4VA53 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC37.67■■■■□ 3.62
Pds5bQ4VA53 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Pds5bQ4VA53 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC37.66■■■■□ 3.62
Pds5bQ4VA53 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Pds5bQ4VA53 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC37.65■■■■□ 3.62
Pds5bQ4VA53 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Pds5bQ4VA53 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Pds5bQ4VA53 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Pds5bQ4VA53 Gm12933-201ENSMUST00000120203 872 ntBASIC37.62■■■■□ 3.61
Pds5bQ4VA53 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Pds5bQ4VA53 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC37.62■■■■□ 3.61
Pds5bQ4VA53 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Pds5bQ4VA53 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
Pds5bQ4VA53 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC37.61■■■■□ 3.61
Pds5bQ4VA53 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Pds5bQ4VA53 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC37.6■■■■□ 3.61
Pds5bQ4VA53 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Pds5bQ4VA53 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Pds5bQ4VA53 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Pds5bQ4VA53 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
Pds5bQ4VA53 Gm7143-201ENSMUST00000222811 859 ntBASIC37.6■■■■□ 3.61
Pds5bQ4VA53 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
Pds5bQ4VA53 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC37.59■■■■□ 3.61
Pds5bQ4VA53 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Pds5bQ4VA53 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Pds5bQ4VA53 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC37.59■■■■□ 3.61
Pds5bQ4VA53 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Pds5bQ4VA53 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
Pds5bQ4VA53 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC37.58■■■■□ 3.61
Pds5bQ4VA53 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Pds5bQ4VA53 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Pds5bQ4VA53 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC37.58■■■■□ 3.61
Pds5bQ4VA53 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC37.57■■■■□ 3.6
Pds5bQ4VA53 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC37.57■■■■□ 3.6
Pds5bQ4VA53 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC37.57■■■■□ 3.6
Pds5bQ4VA53 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC37.57■■■■□ 3.6
Pds5bQ4VA53 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC37.56■■■■□ 3.6
Pds5bQ4VA53 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC37.56■■■■□ 3.6
Pds5bQ4VA53 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC37.56■■■■□ 3.6
Pds5bQ4VA53 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC37.56■■■■□ 3.6
Pds5bQ4VA53 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC37.55■■■■□ 3.6
Pds5bQ4VA53 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Pds5bQ4VA53 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC37.55■■■■□ 3.6
Pds5bQ4VA53 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Pds5bQ4VA53 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC37.54■■■■□ 3.6
Pds5bQ4VA53 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC37.54■■■■□ 3.6
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms