Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc2Q4U2R1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc2Q4U2R1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc2Q4U2R1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc2Q4U2R1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc2Q4U2R1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc2Q4U2R1 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.97□□□□□ -0.33
Herc2Q4U2R1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Fezf2-202ENSMUST00000224023 1917 ntBASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Herc2Q4U2R1 Gm20760-201ENSMUST00000179197 648 ntBASIC12.96□□□□□ -0.33
Herc2Q4U2R1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Herc2Q4U2R1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Herc2Q4U2R1 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.96□□□□□ -0.33
Herc2Q4U2R1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.96□□□□□ -0.33
Herc2Q4U2R1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Herc2Q4U2R1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.96□□□□□ -0.33
Herc2Q4U2R1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Herc2Q4U2R1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.96□□□□□ -0.34
Herc2Q4U2R1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Herc2Q4U2R1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Herc2Q4U2R1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Herc2Q4U2R1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Herc2Q4U2R1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.95□□□□□ -0.34
Herc2Q4U2R1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.95□□□□□ -0.34
Herc2Q4U2R1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Herc2Q4U2R1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Herc2Q4U2R1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Herc2Q4U2R1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.95□□□□□ -0.34
Herc2Q4U2R1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Herc2Q4U2R1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC12.93□□□□□ -0.34
Herc2Q4U2R1 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.93□□□□□ -0.34
Herc2Q4U2R1 Gm12441-201ENSMUST00000121806 588 ntBASIC12.93□□□□□ -0.34
Herc2Q4U2R1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Herc2Q4U2R1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Herc2Q4U2R1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
Herc2Q4U2R1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Herc2Q4U2R1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Herc2Q4U2R1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Herc2Q4U2R1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Herc2Q4U2R1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.92□□□□□ -0.34
Herc2Q4U2R1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.92□□□□□ -0.34
Herc2Q4U2R1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.92□□□□□ -0.34
Herc2Q4U2R1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Herc2Q4U2R1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Herc2Q4U2R1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Herc2Q4U2R1 Gm8520-201ENSMUST00000186517 868 ntBASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Gm4968-201ENSMUST00000071458 858 ntBASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Herc2Q4U2R1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Gm13836-201ENSMUST00000121159 501 ntBASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.9□□□□□ -0.34
Herc2Q4U2R1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Herc2Q4U2R1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Herc2Q4U2R1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Herc2Q4U2R1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.89□□□□□ -0.35
Herc2Q4U2R1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Herc2Q4U2R1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Herc2Q4U2R1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.89□□□□□ -0.35
Herc2Q4U2R1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Herc2Q4U2R1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms