Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.38■■□□□ 1.01
Trim80Q3V061 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim80Q3V061 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.38■■□□□ 1.01
Trim80Q3V061 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim80Q3V061 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim80Q3V061 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim80Q3V061 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim80Q3V061 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim80Q3V061 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.37■■□□□ 1.01
Trim80Q3V061 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim80Q3V061 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim80Q3V061 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trim80Q3V061 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trim80Q3V061 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.36■■□□□ 1.01
Trim80Q3V061 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim80Q3V061 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.36■■□□□ 1.01
Trim80Q3V061 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim80Q3V061 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Trim80Q3V061 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim80Q3V061 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim80Q3V061 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim80Q3V061 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Trim80Q3V061 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.35■■□□□ 1.01
Trim80Q3V061 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim80Q3V061 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim80Q3V061 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Trim80Q3V061 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.35■■□□□ 1.01
Trim80Q3V061 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim80Q3V061 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Trim80Q3V061 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim80Q3V061 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim80Q3V061 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.34■■□□□ 1.01
Trim80Q3V061 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim80Q3V061 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim80Q3V061 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim80Q3V061 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim80Q3V061 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim80Q3V061 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim80Q3V061 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Trim80Q3V061 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Trim80Q3V061 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim80Q3V061 Gm15039-201ENSMUST00000118914 875 ntBASIC21.33■■□□□ 1.01
Trim80Q3V061 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim80Q3V061 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
Trim80Q3V061 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Trim80Q3V061 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim80Q3V061 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim80Q3V061 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.32■■□□□ 1
Trim80Q3V061 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trim80Q3V061 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim80Q3V061 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim80Q3V061 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim80Q3V061 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim80Q3V061 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim80Q3V061 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Trim80Q3V061 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim80Q3V061 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.31■■□□□ 1
Trim80Q3V061 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim80Q3V061 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trim80Q3V061 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.31■■□□□ 1
Trim80Q3V061 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Trim80Q3V061 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim80Q3V061 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim80Q3V061 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim80Q3V061 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim80Q3V061 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim80Q3V061 Gm15546-201ENSMUST00000122095 826 ntBASIC21.3■■□□□ 1
Trim80Q3V061 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trim80Q3V061 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim80Q3V061 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trim80Q3V061 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim80Q3V061 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim80Q3V061 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim80Q3V061 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim80Q3V061 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim80Q3V061 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trim80Q3V061 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trim80Q3V061 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trim80Q3V061 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim80Q3V061 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Trim80Q3V061 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim80Q3V061 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.28■■□□□ 1
Trim80Q3V061 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.28■■□□□ 1
Trim80Q3V061 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim80Q3V061 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim80Q3V061 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim80Q3V061 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim80Q3V061 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trim80Q3V061 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim80Q3V061 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim80Q3V061 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim80Q3V061 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Trim80Q3V061 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim80Q3V061 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim80Q3V061 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim80Q3V061 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim80Q3V061 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim80Q3V061 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trim80Q3V061 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Trim80Q3V061 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms