Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf44Q3UHJ8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf44Q3UHJ8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf44Q3UHJ8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf44Q3UHJ8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.22■□□□□ 0.83
Rnf44Q3UHJ8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf44Q3UHJ8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf44Q3UHJ8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rnf44Q3UHJ8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf44Q3UHJ8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.2■□□□□ 0.82
Rnf44Q3UHJ8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf44Q3UHJ8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf44Q3UHJ8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf44Q3UHJ8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf44Q3UHJ8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf44Q3UHJ8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf44Q3UHJ8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf44Q3UHJ8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rnf44Q3UHJ8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rnf44Q3UHJ8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.18■□□□□ 0.82
Rnf44Q3UHJ8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf44Q3UHJ8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rnf44Q3UHJ8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf44Q3UHJ8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf44Q3UHJ8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf44Q3UHJ8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf44Q3UHJ8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf44Q3UHJ8 Gm40881-201ENSMUST00000223397 166 ntBASIC20.17■□□□□ 0.82
Rnf44Q3UHJ8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf44Q3UHJ8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf44Q3UHJ8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf44Q3UHJ8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf44Q3UHJ8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf44Q3UHJ8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf44Q3UHJ8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Rnf44Q3UHJ8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf44Q3UHJ8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rnf44Q3UHJ8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf44Q3UHJ8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf44Q3UHJ8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf44Q3UHJ8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Rnf44Q3UHJ8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rnf44Q3UHJ8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf44Q3UHJ8 Gm9959-201ENSMUST00000068277 390 ntBASIC20.14■□□□□ 0.81
Rnf44Q3UHJ8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf44Q3UHJ8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf44Q3UHJ8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf44Q3UHJ8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf44Q3UHJ8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.13■□□□□ 0.81
Rnf44Q3UHJ8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.13■□□□□ 0.81
Rnf44Q3UHJ8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf44Q3UHJ8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf44Q3UHJ8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf44Q3UHJ8 Rps24-207ENSMUST00000224568 714 ntBASIC20.12■□□□□ 0.81
Rnf44Q3UHJ8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.12■□□□□ 0.81
Rnf44Q3UHJ8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.12■□□□□ 0.81
Rnf44Q3UHJ8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf44Q3UHJ8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.12■□□□□ 0.81
Rnf44Q3UHJ8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.11■□□□□ 0.81
Rnf44Q3UHJ8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf44Q3UHJ8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf44Q3UHJ8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.11■□□□□ 0.81
Rnf44Q3UHJ8 Gm45102-201ENSMUST00000207427 857 ntBASIC20.11■□□□□ 0.81
Rnf44Q3UHJ8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf44Q3UHJ8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf44Q3UHJ8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf44Q3UHJ8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rnf44Q3UHJ8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms