Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.89■□□□□ 0.77
Spg11Q3UHA3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Spg11Q3UHA3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Spg11Q3UHA3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Spg11Q3UHA3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Spg11Q3UHA3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Spg11Q3UHA3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.88■□□□□ 0.77
Spg11Q3UHA3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Spg11Q3UHA3 Gm9870-201ENSMUST00000063874 645 ntBASIC19.87■□□□□ 0.77
Spg11Q3UHA3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Spg11Q3UHA3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Spg11Q3UHA3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Spg11Q3UHA3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.87■□□□□ 0.77
Spg11Q3UHA3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Spg11Q3UHA3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spg11Q3UHA3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spg11Q3UHA3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.86■□□□□ 0.77
Spg11Q3UHA3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.86■□□□□ 0.77
Spg11Q3UHA3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Spg11Q3UHA3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spg11Q3UHA3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spg11Q3UHA3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.86■□□□□ 0.77
Spg11Q3UHA3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Spg11Q3UHA3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Spg11Q3UHA3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Spg11Q3UHA3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Spg11Q3UHA3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Spg11Q3UHA3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Spg11Q3UHA3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Spg11Q3UHA3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Spg11Q3UHA3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spg11Q3UHA3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
Spg11Q3UHA3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spg11Q3UHA3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spg11Q3UHA3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spg11Q3UHA3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Spg11Q3UHA3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.84■□□□□ 0.77
Spg11Q3UHA3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Spg11Q3UHA3 Gm7143-201ENSMUST00000222811 859 ntBASIC19.84■□□□□ 0.77
Spg11Q3UHA3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Spg11Q3UHA3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Spg11Q3UHA3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
Spg11Q3UHA3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Spg11Q3UHA3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Spg11Q3UHA3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Spg11Q3UHA3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Spg11Q3UHA3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Spg11Q3UHA3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Spg11Q3UHA3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Spg11Q3UHA3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Spg11Q3UHA3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.82■□□□□ 0.76
Spg11Q3UHA3 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.81■□□□□ 0.76
Spg11Q3UHA3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Spg11Q3UHA3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.81■□□□□ 0.76
Spg11Q3UHA3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Spg11Q3UHA3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Spg11Q3UHA3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Spg11Q3UHA3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.8■□□□□ 0.76
Spg11Q3UHA3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Spg11Q3UHA3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Spg11Q3UHA3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.78■□□□□ 0.76
Spg11Q3UHA3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.78■□□□□ 0.76
Spg11Q3UHA3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Spg11Q3UHA3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Spg11Q3UHA3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.77■□□□□ 0.76
Spg11Q3UHA3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.77■□□□□ 0.76
Spg11Q3UHA3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Spg11Q3UHA3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Spg11Q3UHA3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Spg11Q3UHA3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.77■□□□□ 0.76
Spg11Q3UHA3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Spg11Q3UHA3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Spg11Q3UHA3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Spg11Q3UHA3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms