Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Vars2Q3U2A8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Vars2Q3U2A8 Gm10129-202ENSMUST00000193100 1316 ntBASIC26.77■■□□□ 1.88
Vars2Q3U2A8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Vars2Q3U2A8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Vars2Q3U2A8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
Vars2Q3U2A8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.88
Vars2Q3U2A8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.76■■□□□ 1.87
Vars2Q3U2A8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Vars2Q3U2A8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC26.76■■□□□ 1.87
Vars2Q3U2A8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Vars2Q3U2A8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Vars2Q3U2A8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Vars2Q3U2A8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.75■■□□□ 1.87
Vars2Q3U2A8 Gm6085-201ENSMUST00000182774 1470 ntBASIC26.75■■□□□ 1.87
Vars2Q3U2A8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC26.75■■□□□ 1.87
Vars2Q3U2A8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Vars2Q3U2A8 Gm7160-202ENSMUST00000188519 1027 ntBASIC26.75■■□□□ 1.87
Vars2Q3U2A8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Vars2Q3U2A8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Vars2Q3U2A8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.74■■□□□ 1.87
Vars2Q3U2A8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Vars2Q3U2A8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Vars2Q3U2A8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Vars2Q3U2A8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC26.73■■□□□ 1.87
Vars2Q3U2A8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Vars2Q3U2A8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Vars2Q3U2A8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Vars2Q3U2A8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
Vars2Q3U2A8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Vars2Q3U2A8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Vars2Q3U2A8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Vars2Q3U2A8 Gm12669-201ENSMUST00000122162 1009 ntBASIC26.71■■□□□ 1.87
Vars2Q3U2A8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Vars2Q3U2A8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Vars2Q3U2A8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Vars2Q3U2A8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Vars2Q3U2A8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Vars2Q3U2A8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Vars2Q3U2A8 Spcs1-204ENSMUST00000226782 949 ntBASIC26.69■■□□□ 1.86
Vars2Q3U2A8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC26.68■■□□□ 1.86
Vars2Q3U2A8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Vars2Q3U2A8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Vars2Q3U2A8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Vars2Q3U2A8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Vars2Q3U2A8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC26.67■■□□□ 1.86
Vars2Q3U2A8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC26.67■■□□□ 1.86
Vars2Q3U2A8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Vars2Q3U2A8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.66■■□□□ 1.86
Vars2Q3U2A8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.66■■□□□ 1.86
Vars2Q3U2A8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Vars2Q3U2A8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Vars2Q3U2A8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Vars2Q3U2A8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Vars2Q3U2A8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Vars2Q3U2A8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC26.65■■□□□ 1.86
Vars2Q3U2A8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Vars2Q3U2A8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.64■■□□□ 1.86
Vars2Q3U2A8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC26.64■■□□□ 1.86
Vars2Q3U2A8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC26.64■■□□□ 1.86
Vars2Q3U2A8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC26.64■■□□□ 1.86
Vars2Q3U2A8 Gm18671-201ENSMUST00000214826 683 ntBASIC26.64■■□□□ 1.86
Vars2Q3U2A8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC26.64■■□□□ 1.86
Vars2Q3U2A8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Vars2Q3U2A8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Vars2Q3U2A8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Vars2Q3U2A8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Vars2Q3U2A8 Gm40848-201ENSMUST00000221998 324 ntBASIC26.63■■□□□ 1.85
Vars2Q3U2A8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Vars2Q3U2A8 AV356131-201ENSMUST00000206201 750 ntBASIC26.62■■□□□ 1.85
Vars2Q3U2A8 Gm10033-202ENSMUST00000211874 928 ntBASIC26.62■■□□□ 1.85
Vars2Q3U2A8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC26.62■■□□□ 1.85
Vars2Q3U2A8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Vars2Q3U2A8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC26.61■■□□□ 1.85
Vars2Q3U2A8 Gm7143-201ENSMUST00000222811 859 ntBASIC26.61■■□□□ 1.85
Vars2Q3U2A8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Vars2Q3U2A8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
Vars2Q3U2A8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.6■■□□□ 1.85
Vars2Q3U2A8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Vars2Q3U2A8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Vars2Q3U2A8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vars2Q3U2A8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Vars2Q3U2A8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Vars2Q3U2A8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Vars2Q3U2A8 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.58■■□□□ 1.85
Vars2Q3U2A8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vars2Q3U2A8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vars2Q3U2A8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Vars2Q3U2A8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vars2Q3U2A8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vars2Q3U2A8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.84
Vars2Q3U2A8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Vars2Q3U2A8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC26.57■■□□□ 1.84
Vars2Q3U2A8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC26.56■■□□□ 1.84
Vars2Q3U2A8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vars2Q3U2A8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC26.56■■□□□ 1.84
Vars2Q3U2A8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vars2Q3U2A8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vars2Q3U2A8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vars2Q3U2A8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms