Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Treml4Q3LRV9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Treml4Q3LRV9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Treml4Q3LRV9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Treml4Q3LRV9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Treml4Q3LRV9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml4Q3LRV9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml4Q3LRV9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml4Q3LRV9 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.63■□□□□ 0.73
Treml4Q3LRV9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Treml4Q3LRV9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml4Q3LRV9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Treml4Q3LRV9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml4Q3LRV9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml4Q3LRV9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Treml4Q3LRV9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.62■□□□□ 0.73
Treml4Q3LRV9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Treml4Q3LRV9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml4Q3LRV9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Treml4Q3LRV9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Treml4Q3LRV9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Treml4Q3LRV9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml4Q3LRV9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.6■□□□□ 0.73
Treml4Q3LRV9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.6■□□□□ 0.73
Treml4Q3LRV9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml4Q3LRV9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Treml4Q3LRV9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Treml4Q3LRV9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Treml4Q3LRV9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.6■□□□□ 0.73
Treml4Q3LRV9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.59■□□□□ 0.73
Treml4Q3LRV9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml4Q3LRV9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml4Q3LRV9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml4Q3LRV9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml4Q3LRV9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Treml4Q3LRV9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Treml4Q3LRV9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Treml4Q3LRV9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Treml4Q3LRV9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.58■□□□□ 0.72
Treml4Q3LRV9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Treml4Q3LRV9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Treml4Q3LRV9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Treml4Q3LRV9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Treml4Q3LRV9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Treml4Q3LRV9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Gm18284-201ENSMUST00000172604 624 ntBASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Treml4Q3LRV9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml4Q3LRV9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.56■□□□□ 0.72
Treml4Q3LRV9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml4Q3LRV9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml4Q3LRV9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.56■□□□□ 0.72
Treml4Q3LRV9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.56■□□□□ 0.72
Treml4Q3LRV9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.56■□□□□ 0.72
Treml4Q3LRV9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Treml4Q3LRV9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Treml4Q3LRV9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.55■□□□□ 0.72
Treml4Q3LRV9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Treml4Q3LRV9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Treml4Q3LRV9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Treml4Q3LRV9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Treml4Q3LRV9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Treml4Q3LRV9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Treml4Q3LRV9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Treml4Q3LRV9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Treml4Q3LRV9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Treml4Q3LRV9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Treml4Q3LRV9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Treml4Q3LRV9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.53■□□□□ 0.72
Treml4Q3LRV9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Treml4Q3LRV9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.53■□□□□ 0.72
Treml4Q3LRV9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms