Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.27■■□□□ 1.16
Nhej1Q3KNJ2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nhej1Q3KNJ2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Nhej1Q3KNJ2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.27■■□□□ 1.16
Nhej1Q3KNJ2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nhej1Q3KNJ2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Nhej1Q3KNJ2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nhej1Q3KNJ2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nhej1Q3KNJ2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.25■■□□□ 1.15
Nhej1Q3KNJ2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Nhej1Q3KNJ2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nhej1Q3KNJ2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Nhej1Q3KNJ2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nhej1Q3KNJ2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.24■■□□□ 1.15
Nhej1Q3KNJ2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Nhej1Q3KNJ2 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.24■■□□□ 1.15
Nhej1Q3KNJ2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Nhej1Q3KNJ2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nhej1Q3KNJ2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nhej1Q3KNJ2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.24■■□□□ 1.15
Nhej1Q3KNJ2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nhej1Q3KNJ2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.23■■□□□ 1.15
Nhej1Q3KNJ2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Nhej1Q3KNJ2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.23■■□□□ 1.15
Nhej1Q3KNJ2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Nhej1Q3KNJ2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nhej1Q3KNJ2 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.23■■□□□ 1.15
Nhej1Q3KNJ2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nhej1Q3KNJ2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.22■■□□□ 1.15
Nhej1Q3KNJ2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Nhej1Q3KNJ2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nhej1Q3KNJ2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.22■■□□□ 1.15
Nhej1Q3KNJ2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.22■■□□□ 1.15
Nhej1Q3KNJ2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nhej1Q3KNJ2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nhej1Q3KNJ2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nhej1Q3KNJ2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nhej1Q3KNJ2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Nhej1Q3KNJ2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 Notumos-201ENSMUST00000151998 2659 ntBASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nhej1Q3KNJ2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Nhej1Q3KNJ2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nhej1Q3KNJ2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Nhej1Q3KNJ2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Nhej1Q3KNJ2 Gm7332-201ENSMUST00000118351 454 ntBASIC22.19■■□□□ 1.14
Nhej1Q3KNJ2 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.19■■□□□ 1.14
Nhej1Q3KNJ2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Nhej1Q3KNJ2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Nhej1Q3KNJ2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nhej1Q3KNJ2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Nhej1Q3KNJ2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Nhej1Q3KNJ2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Nhej1Q3KNJ2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Nhej1Q3KNJ2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.18■■□□□ 1.14
Nhej1Q3KNJ2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Nhej1Q3KNJ2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
Nhej1Q3KNJ2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Nhej1Q3KNJ2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Nhej1Q3KNJ2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nhej1Q3KNJ2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.17■■□□□ 1.14
Nhej1Q3KNJ2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nhej1Q3KNJ2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nhej1Q3KNJ2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nhej1Q3KNJ2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Nhej1Q3KNJ2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nhej1Q3KNJ2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Nhej1Q3KNJ2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nhej1Q3KNJ2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Nhej1Q3KNJ2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nhej1Q3KNJ2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nhej1Q3KNJ2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nhej1Q3KNJ2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nhej1Q3KNJ2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms