Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shc1P98083 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Shc1P98083 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc1P98083 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc1P98083 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.8■□□□□ 0.6
Shc1P98083 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc1P98083 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc1P98083 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Shc1P98083 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc1P98083 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc1P98083 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Shc1P98083 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc1P98083 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.79■□□□□ 0.6
Shc1P98083 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc1P98083 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc1P98083 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.79■□□□□ 0.6
Shc1P98083 Gm9959-201ENSMUST00000068277 390 ntBASIC18.79■□□□□ 0.6
Shc1P98083 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc1P98083 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc1P98083 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Shc1P98083 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.79■□□□□ 0.6
Shc1P98083 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.79■□□□□ 0.6
Shc1P98083 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.78■□□□□ 0.6
Shc1P98083 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shc1P98083 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shc1P98083 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Shc1P98083 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Shc1P98083 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Shc1P98083 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shc1P98083 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Shc1P98083 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.77■□□□□ 0.6
Shc1P98083 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Shc1P98083 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shc1P98083 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shc1P98083 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shc1P98083 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shc1P98083 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shc1P98083 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.76■□□□□ 0.59
Shc1P98083 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Shc1P98083 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shc1P98083 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shc1P98083 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.75■□□□□ 0.59
Shc1P98083 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shc1P98083 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shc1P98083 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shc1P98083 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shc1P98083 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Shc1P98083 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shc1P98083 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.75■□□□□ 0.59
Shc1P98083 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.75■□□□□ 0.59
Shc1P98083 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.75■□□□□ 0.59
Shc1P98083 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.75■□□□□ 0.59
Shc1P98083 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.75■□□□□ 0.59
Shc1P98083 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shc1P98083 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Shc1P98083 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shc1P98083 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shc1P98083 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.74■□□□□ 0.59
Shc1P98083 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.74■□□□□ 0.59
Shc1P98083 Gm10399-202ENSMUST00000202768 748 ntBASIC18.74■□□□□ 0.59
Shc1P98083 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shc1P98083 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shc1P98083 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Shc1P98083 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shc1P98083 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shc1P98083 Gm14117-201ENSMUST00000122417 843 ntBASIC18.73■□□□□ 0.59
Shc1P98083 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shc1P98083 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shc1P98083 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shc1P98083 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shc1P98083 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shc1P98083 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Shc1P98083 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shc1P98083 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.72■□□□□ 0.59
Shc1P98083 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.72■□□□□ 0.59
Shc1P98083 Gm40881-201ENSMUST00000223397 166 ntBASIC18.72■□□□□ 0.59
Shc1P98083 Rps24-207ENSMUST00000224568 714 ntBASIC18.72■□□□□ 0.59
Shc1P98083 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Shc1P98083 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shc1P98083 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shc1P98083 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shc1P98083 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shc1P98083 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.71■□□□□ 0.59
Shc1P98083 Etf1-202ENSMUST00000180351 108 ntBASIC18.71■□□□□ 0.59
Shc1P98083 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shc1P98083 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Shc1P98083 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shc1P98083 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shc1P98083 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.7■□□□□ 0.58
Shc1P98083 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shc1P98083 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shc1P98083 Gm45102-201ENSMUST00000207427 857 ntBASIC18.7■□□□□ 0.58
Shc1P98083 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.7■□□□□ 0.58
Shc1P98083 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shc1P98083 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shc1P98083 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Shc1P98083 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shc1P98083 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Shc1P98083 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shc1P98083 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms