Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19■□□□□ 0.63
Scn1bP97952 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1bP97952 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1bP97952 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19■□□□□ 0.63
Scn1bP97952 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1bP97952 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1bP97952 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1bP97952 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1bP97952 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1bP97952 Gm7432-201ENSMUST00000210343 879 ntBASIC18.99■□□□□ 0.63
Scn1bP97952 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1bP97952 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.99■□□□□ 0.63
Scn1bP97952 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1bP97952 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1bP97952 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.99■□□□□ 0.63
Scn1bP97952 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Scn1bP97952 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1bP97952 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1bP97952 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Scn1bP97952 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.98■□□□□ 0.63
Scn1bP97952 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.98■□□□□ 0.63
Scn1bP97952 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn1bP97952 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1bP97952 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1bP97952 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1bP97952 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1bP97952 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1bP97952 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn1bP97952 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn1bP97952 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn1bP97952 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn1bP97952 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scn1bP97952 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scn1bP97952 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1bP97952 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Scn1bP97952 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Scn1bP97952 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1bP97952 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Scn1bP97952 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1bP97952 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1bP97952 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1bP97952 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn1bP97952 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Scn1bP97952 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn1bP97952 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn1bP97952 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn1bP97952 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Scn1bP97952 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.94■□□□□ 0.62
Scn1bP97952 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.93■□□□□ 0.62
Scn1bP97952 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scn1bP97952 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Scn1bP97952 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1bP97952 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1bP97952 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1bP97952 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1bP97952 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1bP97952 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1bP97952 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.93■□□□□ 0.62
Scn1bP97952 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1bP97952 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.92■□□□□ 0.62
Scn1bP97952 Gm11599-201ENSMUST00000118720 878 ntBASIC18.92■□□□□ 0.62
Scn1bP97952 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.92■□□□□ 0.62
Scn1bP97952 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1bP97952 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1bP97952 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1bP97952 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1bP97952 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.92■□□□□ 0.62
Scn1bP97952 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1bP97952 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scn1bP97952 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scn1bP97952 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn1bP97952 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn1bP97952 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1bP97952 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1bP97952 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1bP97952 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1bP97952 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.91■□□□□ 0.62
Scn1bP97952 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Scn1bP97952 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1bP97952 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn1bP97952 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.9■□□□□ 0.62
Scn1bP97952 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1bP97952 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1bP97952 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1bP97952 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1bP97952 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn1bP97952 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn1bP97952 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1bP97952 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn1bP97952 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Scn1bP97952 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Scn1bP97952 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.89■□□□□ 0.61
Scn1bP97952 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Scn1bP97952 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Scn1bP97952 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn1bP97952 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.89■□□□□ 0.61
Scn1bP97952 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.89■□□□□ 0.61
Scn1bP97952 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scn1bP97952 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn1bP97952 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms