Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrkdcP97313 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.82□□□□□ -0.04
PrkdcP97313 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrkdcP97313 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PrkdcP97313 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.81□□□□□ -0.04
PrkdcP97313 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.81□□□□□ -0.04
PrkdcP97313 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrkdcP97313 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrkdcP97313 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PrkdcP97313 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrkdcP97313 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PrkdcP97313 Gm10252-201ENSMUST00000209541 832 ntBASIC14.81□□□□□ -0.04
PrkdcP97313 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrkdcP97313 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PrkdcP97313 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrkdcP97313 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrkdcP97313 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.8□□□□□ -0.04
PrkdcP97313 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PrkdcP97313 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PrkdcP97313 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PrkdcP97313 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
PrkdcP97313 Gm40848-201ENSMUST00000221998 324 ntBASIC14.8□□□□□ -0.04
PrkdcP97313 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PrkdcP97313 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.8□□□□□ -0.04
PrkdcP97313 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrkdcP97313 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrkdcP97313 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.79□□□□□ -0.04
PrkdcP97313 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrkdcP97313 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrkdcP97313 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PrkdcP97313 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrkdcP97313 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PrkdcP97313 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.79□□□□□ -0.04
PrkdcP97313 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.79□□□□□ -0.04
PrkdcP97313 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.79□□□□□ -0.04
PrkdcP97313 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.79□□□□□ -0.04
PrkdcP97313 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PrkdcP97313 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PrkdcP97313 Gm10653-202ENSMUST00000139570 835 ntBASIC14.78□□□□□ -0.04
PrkdcP97313 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrkdcP97313 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.78□□□□□ -0.04
PrkdcP97313 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.78□□□□□ -0.04
PrkdcP97313 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrkdcP97313 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PrkdcP97313 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PrkdcP97313 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PrkdcP97313 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PrkdcP97313 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.78□□□□□ -0.04
PrkdcP97313 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrkdcP97313 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.78□□□□□ -0.04
PrkdcP97313 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PrkdcP97313 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
PrkdcP97313 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrkdcP97313 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
PrkdcP97313 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PrkdcP97313 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.77□□□□□ -0.05
PrkdcP97313 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.77□□□□□ -0.05
PrkdcP97313 Gm18671-201ENSMUST00000214826 683 ntBASIC14.77□□□□□ -0.05
PrkdcP97313 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PrkdcP97313 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.77□□□□□ -0.05
PrkdcP97313 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PrkdcP97313 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PrkdcP97313 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PrkdcP97313 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PrkdcP97313 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PrkdcP97313 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PrkdcP97313 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PrkdcP97313 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.76□□□□□ -0.05
PrkdcP97313 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PrkdcP97313 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC14.75□□□□□ -0.05
PrkdcP97313 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PrkdcP97313 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.75□□□□□ -0.05
PrkdcP97313 Gm10602-201ENSMUST00000098239 609 ntBASIC14.75□□□□□ -0.05
PrkdcP97313 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PrkdcP97313 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PrkdcP97313 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PrkdcP97313 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.74□□□□□ -0.05
PrkdcP97313 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PrkdcP97313 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PrkdcP97313 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PrkdcP97313 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PrkdcP97313 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PrkdcP97313 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PrkdcP97313 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.73□□□□□ -0.05
PrkdcP97313 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PrkdcP97313 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PrkdcP97313 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
PrkdcP97313 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PrkdcP97313 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.73□□□□□ -0.05
PrkdcP97313 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PrkdcP97313 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms