Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ThraP63058 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ThraP63058 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ThraP63058 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ThraP63058 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ThraP63058 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.03■□□□□ 0.96
ThraP63058 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ThraP63058 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ThraP63058 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.03■□□□□ 0.96
ThraP63058 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ThraP63058 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ThraP63058 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ThraP63058 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.02■□□□□ 0.96
ThraP63058 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ThraP63058 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ThraP63058 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ThraP63058 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ThraP63058 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ThraP63058 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.01■□□□□ 0.95
ThraP63058 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ThraP63058 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ThraP63058 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.01■□□□□ 0.95
ThraP63058 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ThraP63058 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ThraP63058 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ThraP63058 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
ThraP63058 Gm5131-201ENSMUST00000212776 1238 ntBASIC21■□□□□ 0.95
ThraP63058 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ThraP63058 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ThraP63058 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ThraP63058 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ThraP63058 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ThraP63058 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ThraP63058 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.99■□□□□ 0.95
ThraP63058 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ThraP63058 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ThraP63058 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ThraP63058 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ThraP63058 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ThraP63058 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ThraP63058 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ThraP63058 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ThraP63058 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ThraP63058 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ThraP63058 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ThraP63058 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ThraP63058 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.98■□□□□ 0.95
ThraP63058 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ThraP63058 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ThraP63058 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ThraP63058 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ThraP63058 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.97■□□□□ 0.95
ThraP63058 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.97■□□□□ 0.95
ThraP63058 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.97■□□□□ 0.95
ThraP63058 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
ThraP63058 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ThraP63058 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ThraP63058 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
ThraP63058 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ThraP63058 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ThraP63058 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
ThraP63058 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ThraP63058 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ThraP63058 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.96■□□□□ 0.95
ThraP63058 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.96■□□□□ 0.95
ThraP63058 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ThraP63058 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ThraP63058 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.96■□□□□ 0.95
ThraP63058 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ThraP63058 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ThraP63058 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ThraP63058 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ThraP63058 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ThraP63058 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ThraP63058 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.95■□□□□ 0.94
ThraP63058 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ThraP63058 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ThraP63058 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.94■□□□□ 0.94
ThraP63058 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ThraP63058 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ThraP63058 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ThraP63058 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ThraP63058 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ThraP63058 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ThraP63058 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ThraP63058 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.93■□□□□ 0.94
ThraP63058 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ThraP63058 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ThraP63058 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ThraP63058 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ThraP63058 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.92■□□□□ 0.94
ThraP63058 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ThraP63058 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
ThraP63058 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.92■□□□□ 0.94
ThraP63058 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms