Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpl39P62892 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.84□□□□□ -0.03
Rpl39P62892 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpl39P62892 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpl39P62892 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.84□□□□□ -0.03
Rpl39P62892 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpl39P62892 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpl39P62892 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpl39P62892 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpl39P62892 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpl39P62892 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.83□□□□□ -0.03
Rpl39P62892 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rpl39P62892 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpl39P62892 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpl39P62892 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpl39P62892 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpl39P62892 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpl39P62892 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpl39P62892 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Rpl39P62892 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpl39P62892 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Rpl39P62892 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rpl39P62892 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.82□□□□□ -0.04
Rpl39P62892 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.82□□□□□ -0.04
Rpl39P62892 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Rpl39P62892 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpl39P62892 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpl39P62892 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpl39P62892 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpl39P62892 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rpl39P62892 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpl39P62892 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rpl39P62892 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpl39P62892 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rpl39P62892 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rpl39P62892 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Rpl39P62892 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.8□□□□□ -0.04
Rpl39P62892 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rpl39P62892 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rpl39P62892 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Rpl39P62892 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rpl39P62892 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpl39P62892 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpl39P62892 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.79□□□□□ -0.04
Rpl39P62892 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpl39P62892 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rpl39P62892 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpl39P62892 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpl39P62892 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpl39P62892 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rpl39P62892 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rpl39P62892 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rpl39P62892 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 Gm44428-201ENSMUST00000204474 874 ntBASIC14.78□□□□□ -0.04
Rpl39P62892 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.78□□□□□ -0.04
Rpl39P62892 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rpl39P62892 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.78□□□□□ -0.04
Rpl39P62892 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rpl39P62892 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rpl39P62892 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpl39P62892 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rpl39P62892 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpl39P62892 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rpl39P62892 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rpl39P62892 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpl39P62892 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpl39P62892 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rpl39P62892 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpl39P62892 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpl39P62892 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rpl39P62892 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Rpl39P62892 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rpl39P62892 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Rpl39P62892 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms