Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm5P62322 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm5P62322 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm5P62322 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm5P62322 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.36■□□□□ 0.37
Lsm5P62322 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm5P62322 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm5P62322 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Lsm5P62322 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.35■□□□□ 0.37
Lsm5P62322 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.35■□□□□ 0.37
Lsm5P62322 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm5P62322 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lsm5P62322 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm5P62322 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.34■□□□□ 0.37
Lsm5P62322 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm5P62322 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm5P62322 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.34■□□□□ 0.37
Lsm5P62322 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lsm5P62322 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lsm5P62322 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm5P62322 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm5P62322 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm5P62322 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lsm5P62322 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Lsm5P62322 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm5P62322 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm5P62322 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm5P62322 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.33■□□□□ 0.37
Lsm5P62322 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Lsm5P62322 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm5P62322 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm5P62322 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm5P62322 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm5P62322 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Lsm5P62322 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm5P62322 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm5P62322 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm5P62322 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm5P62322 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Lsm5P62322 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm5P62322 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm5P62322 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm5P62322 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Lsm5P62322 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm5P62322 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm5P62322 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.31■□□□□ 0.36
Lsm5P62322 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lsm5P62322 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.31■□□□□ 0.36
Lsm5P62322 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm5P62322 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.31■□□□□ 0.36
Lsm5P62322 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm5P62322 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lsm5P62322 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm5P62322 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm5P62322 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.3■□□□□ 0.36
Lsm5P62322 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.3■□□□□ 0.36
Lsm5P62322 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.3■□□□□ 0.36
Lsm5P62322 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm5P62322 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm5P62322 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm5P62322 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm5P62322 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm5P62322 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lsm5P62322 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm5P62322 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm5P62322 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm5P62322 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lsm5P62322 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Lsm5P62322 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm5P62322 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm5P62322 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.29■□□□□ 0.36
Lsm5P62322 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm5P62322 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm5P62322 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Lsm5P62322 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lsm5P62322 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm5P62322 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm5P62322 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.28■□□□□ 0.36
Lsm5P62322 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm5P62322 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.28■□□□□ 0.36
Lsm5P62322 Mir3960-201ENSMUST00000198213 73 ntBASIC17.28■□□□□ 0.36
Lsm5P62322 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm5P62322 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lsm5P62322 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm5P62322 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lsm5P62322 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.28■□□□□ 0.36
Lsm5P62322 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lsm5P62322 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lsm5P62322 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm5P62322 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm5P62322 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms