Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cks1bP61025 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cks1bP61025 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cks1bP61025 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC14.73□□□□□ -0.05
Cks1bP61025 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Cks1bP61025 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cks1bP61025 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1bP61025 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1bP61025 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.73□□□□□ -0.05
Cks1bP61025 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1bP61025 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.73□□□□□ -0.05
Cks1bP61025 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1bP61025 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1bP61025 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1bP61025 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.73□□□□□ -0.05
Cks1bP61025 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1bP61025 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cks1bP61025 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Cks1bP61025 Gm4799-201ENSMUST00000095396 657 ntBASIC14.72□□□□□ -0.05
Cks1bP61025 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1bP61025 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1bP61025 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1bP61025 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1bP61025 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1bP61025 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1bP61025 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cks1bP61025 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cks1bP61025 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1bP61025 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1bP61025 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1bP61025 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1bP61025 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1bP61025 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1bP61025 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cks1bP61025 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1bP61025 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cks1bP61025 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1bP61025 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.71□□□□□ -0.05
Cks1bP61025 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cks1bP61025 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Cks1bP61025 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Cks1bP61025 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1bP61025 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1bP61025 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cks1bP61025 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1bP61025 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC14.7□□□□□ -0.06
Cks1bP61025 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cks1bP61025 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cks1bP61025 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1bP61025 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cks1bP61025 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Cks1bP61025 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.7□□□□□ -0.06
Cks1bP61025 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cks1bP61025 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cks1bP61025 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Cks1bP61025 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.69□□□□□ -0.06
Cks1bP61025 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1bP61025 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1bP61025 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1bP61025 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1bP61025 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1bP61025 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1bP61025 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1bP61025 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1bP61025 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Cks1bP61025 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.67□□□□□ -0.06
Cks1bP61025 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.67□□□□□ -0.06
Cks1bP61025 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cks1bP61025 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.67□□□□□ -0.06
Cks1bP61025 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1bP61025 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cks1bP61025 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1bP61025 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1bP61025 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1bP61025 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms