Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cks2P56390 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cks2P56390 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cks2P56390 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cks2P56390 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Cks2P56390 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cks2P56390 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.41■□□□□ 0.38
Cks2P56390 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cks2P56390 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cks2P56390 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.41■□□□□ 0.38
Cks2P56390 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cks2P56390 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cks2P56390 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cks2P56390 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cks2P56390 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cks2P56390 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cks2P56390 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cks2P56390 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cks2P56390 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Cks2P56390 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cks2P56390 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cks2P56390 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cks2P56390 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cks2P56390 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cks2P56390 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cks2P56390 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cks2P56390 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cks2P56390 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cks2P56390 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cks2P56390 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.38■□□□□ 0.37
Cks2P56390 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cks2P56390 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cks2P56390 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.37■□□□□ 0.37
Cks2P56390 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cks2P56390 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.37■□□□□ 0.37
Cks2P56390 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.37■□□□□ 0.37
Cks2P56390 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cks2P56390 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Cks2P56390 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cks2P56390 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks2P56390 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks2P56390 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks2P56390 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks2P56390 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks2P56390 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks2P56390 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks2P56390 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cks2P56390 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks2P56390 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cks2P56390 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.35■□□□□ 0.37
Cks2P56390 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cks2P56390 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.35■□□□□ 0.37
Cks2P56390 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cks2P56390 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cks2P56390 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cks2P56390 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cks2P56390 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cks2P56390 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cks2P56390 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cks2P56390 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cks2P56390 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cks2P56390 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cks2P56390 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cks2P56390 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cks2P56390 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cks2P56390 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.33■□□□□ 0.36
Cks2P56390 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Cks2P56390 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.33■□□□□ 0.36
Cks2P56390 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cks2P56390 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Cks2P56390 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cks2P56390 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cks2P56390 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cks2P56390 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cks2P56390 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cks2P56390 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cks2P56390 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cks2P56390 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cks2P56390 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.32■□□□□ 0.36
Cks2P56390 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cks2P56390 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cks2P56390 Notumos-201ENSMUST00000151998 2659 ntBASIC17.32■□□□□ 0.36
Cks2P56390 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cks2P56390 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.31■□□□□ 0.36
Cks2P56390 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks2P56390 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks2P56390 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks2P56390 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks2P56390 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cks2P56390 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
Cks2P56390 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms