Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NcanP55066 Gm10493-201ENSMUST00000097270 612 ntBASIC22.64■■□□□ 1.21
NcanP55066 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
NcanP55066 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NcanP55066 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.63■■□□□ 1.21
NcanP55066 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.63■■□□□ 1.21
NcanP55066 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NcanP55066 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NcanP55066 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NcanP55066 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NcanP55066 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NcanP55066 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NcanP55066 Gm42642-201ENSMUST00000200683 355 ntBASIC22.62■■□□□ 1.21
NcanP55066 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
NcanP55066 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NcanP55066 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.61■■□□□ 1.21
NcanP55066 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NcanP55066 Gm27801-201ENSMUST00000184174 223 ntBASIC22.61■■□□□ 1.21
NcanP55066 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NcanP55066 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NcanP55066 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.6■■□□□ 1.21
NcanP55066 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NcanP55066 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NcanP55066 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NcanP55066 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
NcanP55066 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
NcanP55066 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NcanP55066 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NcanP55066 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
NcanP55066 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.58■■□□□ 1.21
NcanP55066 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
NcanP55066 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NcanP55066 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NcanP55066 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.58■■□□□ 1.2
NcanP55066 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NcanP55066 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NcanP55066 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.57■■□□□ 1.2
NcanP55066 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NcanP55066 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.57■■□□□ 1.2
NcanP55066 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
NcanP55066 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NcanP55066 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
NcanP55066 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.56■■□□□ 1.2
NcanP55066 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NcanP55066 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NcanP55066 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.56■■□□□ 1.2
NcanP55066 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.56■■□□□ 1.2
NcanP55066 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.56■■□□□ 1.2
NcanP55066 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.56■■□□□ 1.2
NcanP55066 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NcanP55066 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
NcanP55066 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NcanP55066 Gm26833-201ENSMUST00000180899 440 ntBASIC22.55■■□□□ 1.2
NcanP55066 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NcanP55066 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.55■■□□□ 1.2
NcanP55066 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NcanP55066 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NcanP55066 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
NcanP55066 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NcanP55066 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NcanP55066 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NcanP55066 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.54■■□□□ 1.2
NcanP55066 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.54■■□□□ 1.2
NcanP55066 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NcanP55066 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NcanP55066 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.54■■□□□ 1.2
NcanP55066 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NcanP55066 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NcanP55066 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NcanP55066 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NcanP55066 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NcanP55066 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NcanP55066 Gm43060-201ENSMUST00000200621 289 ntBASIC22.53■■□□□ 1.2
NcanP55066 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NcanP55066 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NcanP55066 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NcanP55066 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
NcanP55066 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NcanP55066 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NcanP55066 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
NcanP55066 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
NcanP55066 Gm6085-201ENSMUST00000182774 1470 ntBASIC22.52■■□□□ 1.2
NcanP55066 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NcanP55066 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NcanP55066 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NcanP55066 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
NcanP55066 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
NcanP55066 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
NcanP55066 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NcanP55066 Gm7977-201ENSMUST00000193787 748 ntBASIC22.5■■□□□ 1.19
NcanP55066 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
NcanP55066 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NcanP55066 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NcanP55066 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NcanP55066 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NcanP55066 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NcanP55066 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NcanP55066 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NcanP55066 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NcanP55066 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms