Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Msh6P54276 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Msh6P54276 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Msh6P54276 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Msh6P54276 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Msh6P54276 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC26.96■■□□□ 1.91
Msh6P54276 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.95■■□□□ 1.9
Msh6P54276 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Msh6P54276 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Msh6P54276 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Msh6P54276 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Msh6P54276 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Msh6P54276 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
Msh6P54276 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Msh6P54276 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC26.94■■□□□ 1.9
Msh6P54276 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Msh6P54276 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC26.94■■□□□ 1.9
Msh6P54276 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.94■■□□□ 1.9
Msh6P54276 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Msh6P54276 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Msh6P54276 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Msh6P54276 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Msh6P54276 Gm18284-201ENSMUST00000172604 624 ntBASIC26.93■■□□□ 1.9
Msh6P54276 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Msh6P54276 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Msh6P54276 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Msh6P54276 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Msh6P54276 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.92■■□□□ 1.9
Msh6P54276 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.92■■□□□ 1.9
Msh6P54276 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Msh6P54276 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Msh6P54276 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
Msh6P54276 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
Msh6P54276 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Msh6P54276 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Msh6P54276 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC26.91■■□□□ 1.9
Msh6P54276 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Msh6P54276 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Msh6P54276 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Msh6P54276 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Msh6P54276 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Msh6P54276 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC26.9■■□□□ 1.9
Msh6P54276 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Msh6P54276 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Msh6P54276 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
Msh6P54276 Gm2011-201ENSMUST00000203124 1263 ntBASIC26.9■■□□□ 1.9
Msh6P54276 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Msh6P54276 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Msh6P54276 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Msh6P54276 Gm9207-201ENSMUST00000198773 1115 ntBASIC26.89■■□□□ 1.9
Msh6P54276 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Msh6P54276 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Msh6P54276 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Msh6P54276 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Msh6P54276 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Msh6P54276 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Msh6P54276 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Msh6P54276 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Msh6P54276 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Msh6P54276 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Msh6P54276 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Msh6P54276 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.87■■□□□ 1.89
Msh6P54276 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Msh6P54276 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Msh6P54276 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Msh6P54276 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Msh6P54276 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Msh6P54276 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
Msh6P54276 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Msh6P54276 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC26.86■■□□□ 1.89
Msh6P54276 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
Msh6P54276 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
Msh6P54276 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
Msh6P54276 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC26.85■■□□□ 1.89
Msh6P54276 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.85■■□□□ 1.89
Msh6P54276 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Msh6P54276 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Msh6P54276 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC26.85■■□□□ 1.89
Msh6P54276 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC26.85■■□□□ 1.89
Msh6P54276 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Msh6P54276 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Msh6P54276 Gm6139-201ENSMUST00000079261 882 ntBASIC26.84■■□□□ 1.89
Msh6P54276 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Msh6P54276 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Msh6P54276 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Msh6P54276 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Msh6P54276 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Msh6P54276 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC26.84■■□□□ 1.89
Msh6P54276 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC26.84■■□□□ 1.89
Msh6P54276 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC26.84■■□□□ 1.89
Msh6P54276 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Msh6P54276 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Msh6P54276 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Msh6P54276 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC26.83■■□□□ 1.88
Msh6P54276 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Msh6P54276 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC26.82■■□□□ 1.88
Msh6P54276 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Msh6P54276 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Msh6P54276 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Msh6P54276 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC26.81■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms