Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.59■□□□□ 0.41
Lhx4P53776 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lhx4P53776 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.59■□□□□ 0.41
Lhx4P53776 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx4P53776 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx4P53776 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lhx4P53776 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Lhx4P53776 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.58■□□□□ 0.4
Lhx4P53776 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.58■□□□□ 0.4
Lhx4P53776 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx4P53776 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.58■□□□□ 0.4
Lhx4P53776 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lhx4P53776 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx4P53776 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx4P53776 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lhx4P53776 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx4P53776 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lhx4P53776 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lhx4P53776 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx4P53776 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Lhx4P53776 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx4P53776 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx4P53776 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx4P53776 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx4P53776 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Lhx4P53776 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lhx4P53776 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx4P53776 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx4P53776 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.55■□□□□ 0.4
Lhx4P53776 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx4P53776 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx4P53776 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Lhx4P53776 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx4P53776 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Lhx4P53776 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx4P53776 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx4P53776 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lhx4P53776 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx4P53776 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lhx4P53776 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx4P53776 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx4P53776 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.54■□□□□ 0.4
Lhx4P53776 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx4P53776 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Lhx4P53776 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.54■□□□□ 0.4
Lhx4P53776 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lhx4P53776 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lhx4P53776 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx4P53776 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lhx4P53776 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx4P53776 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.53■□□□□ 0.4
Lhx4P53776 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx4P53776 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx4P53776 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.53■□□□□ 0.4
Lhx4P53776 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Lhx4P53776 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx4P53776 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx4P53776 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lhx4P53776 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx4P53776 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx4P53776 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Lhx4P53776 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lhx4P53776 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx4P53776 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx4P53776 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx4P53776 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx4P53776 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lhx4P53776 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lhx4P53776 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx4P53776 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lhx4P53776 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx4P53776 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx4P53776 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lhx4P53776 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx4P53776 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.51■□□□□ 0.39
Lhx4P53776 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.51■□□□□ 0.39
Lhx4P53776 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lhx4P53776 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx4P53776 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx4P53776 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx4P53776 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lhx4P53776 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.5■□□□□ 0.39
Lhx4P53776 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx4P53776 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx4P53776 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx4P53776 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Lhx4P53776 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lhx4P53776 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lhx4P53776 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.5■□□□□ 0.39
Lhx4P53776 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lhx4P53776 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx4P53776 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx4P53776 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx4P53776 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx4P53776 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.49■□□□□ 0.39
Lhx4P53776 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx4P53776 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx4P53776 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lhx4P53776 Gm10232-201ENSMUST00000089221 720 ntBASIC17.49■□□□□ 0.39
Lhx4P53776 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms