Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.55■□□□□ 0.88
Lbx1P52955 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lbx1P52955 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
Lbx1P52955 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lbx1P52955 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lbx1P52955 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.54■□□□□ 0.88
Lbx1P52955 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.54■□□□□ 0.88
Lbx1P52955 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.54■□□□□ 0.88
Lbx1P52955 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.54■□□□□ 0.88
Lbx1P52955 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.54■□□□□ 0.88
Lbx1P52955 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lbx1P52955 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lbx1P52955 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Lbx1P52955 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lbx1P52955 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lbx1P52955 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.53■□□□□ 0.88
Lbx1P52955 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lbx1P52955 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lbx1P52955 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lbx1P52955 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lbx1P52955 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lbx1P52955 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Lbx1P52955 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.52■□□□□ 0.88
Lbx1P52955 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.52■□□□□ 0.88
Lbx1P52955 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lbx1P52955 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lbx1P52955 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Lbx1P52955 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.51■□□□□ 0.87
Lbx1P52955 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lbx1P52955 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.51■□□□□ 0.87
Lbx1P52955 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lbx1P52955 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lbx1P52955 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.51■□□□□ 0.87
Lbx1P52955 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Lbx1P52955 Gm20760-201ENSMUST00000179197 648 ntBASIC20.51■□□□□ 0.87
Lbx1P52955 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.51■□□□□ 0.87
Lbx1P52955 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lbx1P52955 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Lbx1P52955 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Lbx1P52955 Gm8520-201ENSMUST00000186517 868 ntBASIC20.5■□□□□ 0.87
Lbx1P52955 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lbx1P52955 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Lbx1P52955 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.5■□□□□ 0.87
Lbx1P52955 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lbx1P52955 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lbx1P52955 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lbx1P52955 Mir6982-201ENSMUST00000184354 68 ntBASIC20.49■□□□□ 0.87
Lbx1P52955 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.49■□□□□ 0.87
Lbx1P52955 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lbx1P52955 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lbx1P52955 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lbx1P52955 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.49■□□□□ 0.87
Lbx1P52955 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lbx1P52955 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.48■□□□□ 0.87
Lbx1P52955 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lbx1P52955 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lbx1P52955 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lbx1P52955 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Lbx1P52955 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lbx1P52955 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Lbx1P52955 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lbx1P52955 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lbx1P52955 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Lbx1P52955 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lbx1P52955 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lbx1P52955 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lbx1P52955 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.46■□□□□ 0.87
Lbx1P52955 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.46■□□□□ 0.87
Lbx1P52955 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lbx1P52955 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lbx1P52955 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Lbx1P52955 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Lbx1P52955 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.45■□□□□ 0.86
Lbx1P52955 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lbx1P52955 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Lbx1P52955 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lbx1P52955 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lbx1P52955 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Lbx1P52955 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lbx1P52955 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lbx1P52955 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.44■□□□□ 0.86
Lbx1P52955 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.44■□□□□ 0.86
Lbx1P52955 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lbx1P52955 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lbx1P52955 Gm13836-201ENSMUST00000121159 501 ntBASIC20.43■□□□□ 0.86
Lbx1P52955 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lbx1P52955 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Lbx1P52955 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lbx1P52955 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lbx1P52955 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.42■□□□□ 0.86
Lbx1P52955 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lbx1P52955 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lbx1P52955 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lbx1P52955 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lbx1P52955 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lbx1P52955 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.42■□□□□ 0.86
Lbx1P52955 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lbx1P52955 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.41■□□□□ 0.86
Lbx1P52955 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lbx1P52955 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms