Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr4P51680 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr4P51680 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr4P51680 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr4P51680 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr4P51680 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr4P51680 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr4P51680 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr4P51680 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr4P51680 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Ccr4P51680 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr4P51680 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccr4P51680 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.29■□□□□ 0.68
Ccr4P51680 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Ccr4P51680 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccr4P51680 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr4P51680 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr4P51680 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr4P51680 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr4P51680 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr4P51680 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr4P51680 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccr4P51680 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr4P51680 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr4P51680 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr4P51680 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr4P51680 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr4P51680 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccr4P51680 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccr4P51680 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr4P51680 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccr4P51680 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr4P51680 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr4P51680 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccr4P51680 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr4P51680 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr4P51680 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.26■□□□□ 0.67
Ccr4P51680 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ccr4P51680 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccr4P51680 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr4P51680 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Ccr4P51680 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr4P51680 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr4P51680 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr4P51680 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.25■□□□□ 0.67
Ccr4P51680 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccr4P51680 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccr4P51680 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.24■□□□□ 0.67
Ccr4P51680 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr4P51680 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr4P51680 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccr4P51680 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.24■□□□□ 0.67
Ccr4P51680 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr4P51680 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr4P51680 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr4P51680 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr4P51680 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccr4P51680 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.23■□□□□ 0.67
Ccr4P51680 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccr4P51680 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr4P51680 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr4P51680 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.23■□□□□ 0.67
Ccr4P51680 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.23■□□□□ 0.67
Ccr4P51680 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccr4P51680 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr4P51680 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr4P51680 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr4P51680 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr4P51680 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccr4P51680 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr4P51680 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccr4P51680 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccr4P51680 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr4P51680 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr4P51680 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.22■□□□□ 0.67
Ccr4P51680 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccr4P51680 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccr4P51680 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr4P51680 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.21■□□□□ 0.67
Ccr4P51680 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr4P51680 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.21■□□□□ 0.67
Ccr4P51680 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccr4P51680 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr4P51680 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccr4P51680 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Ccr4P51680 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr4P51680 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr4P51680 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr4P51680 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccr4P51680 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr4P51680 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr4P51680 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr4P51680 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr4P51680 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccr4P51680 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccr4P51680 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.2■□□□□ 0.66
Ccr4P51680 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccr4P51680 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr4P51680 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccr4P51680 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms