Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptx3P48759 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptx3P48759 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
Ptx3P48759 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ptx3P48759 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ptx3P48759 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ptx3P48759 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptx3P48759 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ptx3P48759 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.39■□□□□ 0.69
Ptx3P48759 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Ptx3P48759 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ptx3P48759 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.38■□□□□ 0.69
Ptx3P48759 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.38■□□□□ 0.69
Ptx3P48759 Gm9847-201ENSMUST00000052528 599 ntBASIC19.38■□□□□ 0.69
Ptx3P48759 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptx3P48759 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptx3P48759 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ptx3P48759 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptx3P48759 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptx3P48759 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.37■□□□□ 0.69
Ptx3P48759 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptx3P48759 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptx3P48759 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptx3P48759 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptx3P48759 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptx3P48759 Gm13241-201ENSMUST00000094493 780 ntBASIC19.37■□□□□ 0.69
Ptx3P48759 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.37■□□□□ 0.69
Ptx3P48759 Notumos-201ENSMUST00000151998 2659 ntBASIC19.37■□□□□ 0.69
Ptx3P48759 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ptx3P48759 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ptx3P48759 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ptx3P48759 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ptx3P48759 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.35■□□□□ 0.69
Ptx3P48759 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ptx3P48759 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Ptx3P48759 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptx3P48759 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptx3P48759 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ptx3P48759 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ptx3P48759 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
Ptx3P48759 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ptx3P48759 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ptx3P48759 Gm12922-201ENSMUST00000120626 809 ntBASIC19.34■□□□□ 0.69
Ptx3P48759 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ptx3P48759 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ptx3P48759 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ptx3P48759 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ptx3P48759 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ptx3P48759 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.33■□□□□ 0.68
Ptx3P48759 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ptx3P48759 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ptx3P48759 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ptx3P48759 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ptx3P48759 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ptx3P48759 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptx3P48759 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.32■□□□□ 0.68
Ptx3P48759 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ptx3P48759 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ptx3P48759 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ptx3P48759 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ptx3P48759 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ptx3P48759 Gm15039-201ENSMUST00000118914 875 ntBASIC19.31■□□□□ 0.68
Ptx3P48759 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ptx3P48759 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ptx3P48759 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ptx3P48759 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.31■□□□□ 0.68
Ptx3P48759 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptx3P48759 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ptx3P48759 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.3■□□□□ 0.68
Ptx3P48759 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.3■□□□□ 0.68
Ptx3P48759 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.3■□□□□ 0.68
Ptx3P48759 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptx3P48759 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.3■□□□□ 0.68
Ptx3P48759 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptx3P48759 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ptx3P48759 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ptx3P48759 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptx3P48759 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptx3P48759 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.29■□□□□ 0.68
Ptx3P48759 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.29■□□□□ 0.68
Ptx3P48759 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ptx3P48759 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptx3P48759 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptx3P48759 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptx3P48759 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptx3P48759 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptx3P48759 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.28■□□□□ 0.68
Ptx3P48759 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptx3P48759 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.28■□□□□ 0.68
Ptx3P48759 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptx3P48759 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptx3P48759 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptx3P48759 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Ptx3P48759 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ptx3P48759 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ptx3P48759 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.27■□□□□ 0.68
Ptx3P48759 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.27■□□□□ 0.68
Ptx3P48759 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptx3P48759 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ptx3P48759 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms