Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GdnfP48540 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GdnfP48540 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GdnfP48540 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GdnfP48540 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.18■□□□□ 0.5
GdnfP48540 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GdnfP48540 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GdnfP48540 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GdnfP48540 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GdnfP48540 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GdnfP48540 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.17■□□□□ 0.5
GdnfP48540 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.17■□□□□ 0.5
GdnfP48540 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
GdnfP48540 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GdnfP48540 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GdnfP48540 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.16■□□□□ 0.5
GdnfP48540 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.16■□□□□ 0.5
GdnfP48540 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GdnfP48540 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GdnfP48540 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GdnfP48540 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GdnfP48540 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.16■□□□□ 0.5
GdnfP48540 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 Iqck-206ENSMUST00000208658 2891 ntBASIC18.15■□□□□ 0.5
GdnfP48540 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.15■□□□□ 0.5
GdnfP48540 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.15■□□□□ 0.5
GdnfP48540 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GdnfP48540 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.14■□□□□ 0.5
GdnfP48540 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
GdnfP48540 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GdnfP48540 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.14■□□□□ 0.49
GdnfP48540 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
GdnfP48540 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GdnfP48540 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GdnfP48540 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GdnfP48540 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GdnfP48540 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.13■□□□□ 0.49
GdnfP48540 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.13■□□□□ 0.49
GdnfP48540 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.13■□□□□ 0.49
GdnfP48540 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GdnfP48540 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
GdnfP48540 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GdnfP48540 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GdnfP48540 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GdnfP48540 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
GdnfP48540 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.12■□□□□ 0.49
GdnfP48540 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GdnfP48540 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.12■□□□□ 0.49
GdnfP48540 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.12■□□□□ 0.49
GdnfP48540 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GdnfP48540 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GdnfP48540 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GdnfP48540 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GdnfP48540 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GdnfP48540 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GdnfP48540 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GdnfP48540 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GdnfP48540 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GdnfP48540 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GdnfP48540 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GdnfP48540 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
GdnfP48540 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GdnfP48540 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.1■□□□□ 0.49
GdnfP48540 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
GdnfP48540 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GdnfP48540 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GdnfP48540 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GdnfP48540 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GdnfP48540 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GdnfP48540 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GdnfP48540 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GdnfP48540 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GdnfP48540 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GdnfP48540 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GdnfP48540 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
GdnfP48540 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
GdnfP48540 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GdnfP48540 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GdnfP48540 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
GdnfP48540 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
GdnfP48540 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.08■□□□□ 0.48
GdnfP48540 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms