Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.93■□□□□ 0.78
Prox1P48437 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prox1P48437 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.92■□□□□ 0.78
Prox1P48437 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prox1P48437 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prox1P48437 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prox1P48437 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prox1P48437 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.91■□□□□ 0.78
Prox1P48437 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.91■□□□□ 0.78
Prox1P48437 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.91■□□□□ 0.78
Prox1P48437 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.91■□□□□ 0.78
Prox1P48437 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.91■□□□□ 0.78
Prox1P48437 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Prox1P48437 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.91■□□□□ 0.78
Prox1P48437 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prox1P48437 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prox1P48437 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prox1P48437 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Prox1P48437 Scarna2-201ENSMUST00000157560 414 ntBASIC19.9■□□□□ 0.78
Prox1P48437 Gm9806-201ENSMUST00000051080 552 ntBASIC19.9■□□□□ 0.78
Prox1P48437 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prox1P48437 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prox1P48437 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prox1P48437 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.89■□□□□ 0.77
Prox1P48437 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Prox1P48437 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prox1P48437 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prox1P48437 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prox1P48437 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prox1P48437 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prox1P48437 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Prox1P48437 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Prox1P48437 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prox1P48437 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.88■□□□□ 0.77
Prox1P48437 Gm16437-201ENSMUST00000025669 507 ntBASIC19.88■□□□□ 0.77
Prox1P48437 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prox1P48437 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Prox1P48437 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Prox1P48437 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Prox1P48437 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prox1P48437 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Prox1P48437 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prox1P48437 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Prox1P48437 Gm11175-201ENSMUST00000116172 543 ntBASIC19.87■□□□□ 0.77
Prox1P48437 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prox1P48437 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prox1P48437 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prox1P48437 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Prox1P48437 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Prox1P48437 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Prox1P48437 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Prox1P48437 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Prox1P48437 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Prox1P48437 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prox1P48437 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Prox1P48437 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prox1P48437 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.85■□□□□ 0.77
Prox1P48437 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prox1P48437 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prox1P48437 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Prox1P48437 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prox1P48437 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prox1P48437 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prox1P48437 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prox1P48437 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prox1P48437 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Prox1P48437 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Prox1P48437 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.84■□□□□ 0.77
Prox1P48437 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prox1P48437 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prox1P48437 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prox1P48437 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prox1P48437 Gm11687-201ENSMUST00000118911 886 ntBASIC19.83■□□□□ 0.77
Prox1P48437 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prox1P48437 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prox1P48437 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prox1P48437 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.83■□□□□ 0.76
Prox1P48437 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prox1P48437 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Prox1P48437 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prox1P48437 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prox1P48437 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms