Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-2P42586 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-2P42586 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-2P42586 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.28■□□□□ 0.68
Nkx2-2P42586 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.28■□□□□ 0.68
Nkx2-2P42586 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-2P42586 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-2P42586 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-2P42586 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-2P42586 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-2P42586 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-2P42586 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.27■□□□□ 0.68
Nkx2-2P42586 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nkx2-2P42586 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.27■□□□□ 0.68
Nkx2-2P42586 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nkx2-2P42586 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nkx2-2P42586 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-2P42586 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-2P42586 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-2P42586 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-2P42586 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-2P42586 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-2P42586 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nkx2-2P42586 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-2P42586 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-2P42586 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.25■□□□□ 0.67
Nkx2-2P42586 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Nkx2-2P42586 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-2P42586 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.25■□□□□ 0.67
Nkx2-2P42586 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nkx2-2P42586 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-2P42586 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-2P42586 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-2P42586 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-2P42586 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-2P42586 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-2P42586 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nkx2-2P42586 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-2P42586 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.22■□□□□ 0.67
Nkx2-2P42586 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.22■□□□□ 0.67
Nkx2-2P42586 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-2P42586 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-2P42586 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.22■□□□□ 0.67
Nkx2-2P42586 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Nkx2-2P42586 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nkx2-2P42586 Gm10399-202ENSMUST00000202768 748 ntBASIC19.22■□□□□ 0.67
Nkx2-2P42586 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-2P42586 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.22■□□□□ 0.67
Nkx2-2P42586 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-2P42586 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-2P42586 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Gm5812-201ENSMUST00000061073 957 ntBASIC19.21■□□□□ 0.67
Nkx2-2P42586 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-2P42586 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.2■□□□□ 0.66
Nkx2-2P42586 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-2P42586 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-2P42586 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.19■□□□□ 0.66
Nkx2-2P42586 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-2P42586 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.19■□□□□ 0.66
Nkx2-2P42586 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-2P42586 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nkx2-2P42586 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-2P42586 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-2P42586 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nkx2-2P42586 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-2P42586 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-2P42586 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-2P42586 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.17■□□□□ 0.66
Nkx2-2P42586 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-2P42586 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms