Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.79■□□□□ 0.92
Cd9P40240 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd9P40240 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cd9P40240 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cd9P40240 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd9P40240 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd9P40240 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cd9P40240 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cd9P40240 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd9P40240 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd9P40240 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd9P40240 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd9P40240 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cd9P40240 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd9P40240 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd9P40240 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd9P40240 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cd9P40240 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cd9P40240 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd9P40240 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd9P40240 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd9P40240 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd9P40240 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd9P40240 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd9P40240 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Cd9P40240 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cd9P40240 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd9P40240 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.74■□□□□ 0.91
Cd9P40240 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cd9P40240 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cd9P40240 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd9P40240 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.73■□□□□ 0.91
Cd9P40240 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cd9P40240 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd9P40240 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cd9P40240 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cd9P40240 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd9P40240 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cd9P40240 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd9P40240 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
Cd9P40240 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd9P40240 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Cd9P40240 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cd9P40240 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd9P40240 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cd9P40240 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cd9P40240 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.72■□□□□ 0.91
Cd9P40240 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cd9P40240 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cd9P40240 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd9P40240 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.71■□□□□ 0.91
Cd9P40240 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cd9P40240 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd9P40240 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd9P40240 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.71■□□□□ 0.91
Cd9P40240 Gm10399-202ENSMUST00000202768 748 ntBASIC20.71■□□□□ 0.91
Cd9P40240 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd9P40240 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cd9P40240 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd9P40240 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd9P40240 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd9P40240 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cd9P40240 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd9P40240 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd9P40240 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.7■□□□□ 0.9
Cd9P40240 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cd9P40240 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.7■□□□□ 0.9
Cd9P40240 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd9P40240 Gm10232-201ENSMUST00000089221 720 ntBASIC20.7■□□□□ 0.9
Cd9P40240 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd9P40240 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd9P40240 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd9P40240 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd9P40240 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.69■□□□□ 0.9
Cd9P40240 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd9P40240 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd9P40240 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd9P40240 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd9P40240 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd9P40240 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd9P40240 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd9P40240 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.69■□□□□ 0.9
Cd9P40240 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd9P40240 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd9P40240 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd9P40240 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cd9P40240 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cd9P40240 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cd9P40240 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
Cd9P40240 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cd9P40240 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd9P40240 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd9P40240 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd9P40240 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd9P40240 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd9P40240 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd9P40240 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd9P40240 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd9P40240 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd9P40240 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms