Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd48P18181 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cd48P18181 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd48P18181 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.66■□□□□ 0.58
Cd48P18181 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd48P18181 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd48P18181 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd48P18181 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd48P18181 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cd48P18181 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cd48P18181 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd48P18181 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd48P18181 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cd48P18181 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cd48P18181 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Cd48P18181 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd48P18181 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cd48P18181 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.65■□□□□ 0.58
Cd48P18181 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.65■□□□□ 0.58
Cd48P18181 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cd48P18181 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd48P18181 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd48P18181 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd48P18181 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd48P18181 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd48P18181 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd48P18181 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cd48P18181 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Cd48P18181 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cd48P18181 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd48P18181 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.63■□□□□ 0.57
Cd48P18181 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.63■□□□□ 0.57
Cd48P18181 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.63■□□□□ 0.57
Cd48P18181 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd48P18181 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cd48P18181 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd48P18181 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd48P18181 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd48P18181 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd48P18181 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd48P18181 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd48P18181 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.62■□□□□ 0.57
Cd48P18181 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd48P18181 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd48P18181 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cd48P18181 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd48P18181 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd48P18181 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd48P18181 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd48P18181 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd48P18181 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd48P18181 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd48P18181 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd48P18181 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.6■□□□□ 0.57
Cd48P18181 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd48P18181 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd48P18181 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cd48P18181 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd48P18181 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd48P18181 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd48P18181 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd48P18181 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.59■□□□□ 0.57
Cd48P18181 Gm10420-201ENSMUST00000121713 882 ntBASIC18.59■□□□□ 0.57
Cd48P18181 Gm12366-201ENSMUST00000121722 873 ntBASIC18.59■□□□□ 0.57
Cd48P18181 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.59■□□□□ 0.57
Cd48P18181 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.59■□□□□ 0.57
Cd48P18181 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.59■□□□□ 0.57
Cd48P18181 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd48P18181 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.59■□□□□ 0.57
Cd48P18181 Gm5786-201ENSMUST00000085368 882 ntBASIC18.59■□□□□ 0.57
Cd48P18181 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd48P18181 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Cd48P18181 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cd48P18181 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cd48P18181 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd48P18181 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cd48P18181 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd48P18181 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd48P18181 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd48P18181 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd48P18181 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cd48P18181 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd48P18181 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.57■□□□□ 0.56
Cd48P18181 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.57■□□□□ 0.56
Cd48P18181 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd48P18181 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd48P18181 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd48P18181 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd48P18181 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cd48P18181 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Cd48P18181 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 151.8 ms