Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col4a1P02463 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col4a1P02463 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Col4a1P02463 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Col4a1P02463 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col4a1P02463 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC26.36■■□□□ 1.81
Col4a1P02463 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col4a1P02463 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Col4a1P02463 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col4a1P02463 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col4a1P02463 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col4a1P02463 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col4a1P02463 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC26.34■■□□□ 1.81
Col4a1P02463 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC26.34■■□□□ 1.81
Col4a1P02463 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.34■■□□□ 1.81
Col4a1P02463 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col4a1P02463 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Col4a1P02463 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col4a1P02463 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col4a1P02463 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Col4a1P02463 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Col4a1P02463 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Col4a1P02463 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Col4a1P02463 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Col4a1P02463 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col4a1P02463 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col4a1P02463 Gm12251-201ENSMUST00000117893 792 ntBASIC26.31■■□□□ 1.8
Col4a1P02463 Gm9207-201ENSMUST00000198773 1115 ntBASIC26.31■■□□□ 1.8
Col4a1P02463 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.31■■□□□ 1.8
Col4a1P02463 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col4a1P02463 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col4a1P02463 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Col4a1P02463 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
Col4a1P02463 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col4a1P02463 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col4a1P02463 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col4a1P02463 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Col4a1P02463 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Col4a1P02463 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC26.3■■□□□ 1.8
Col4a1P02463 Gm4430-201ENSMUST00000192413 1943 ntBASIC26.3■■□□□ 1.8
Col4a1P02463 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.29■■□□□ 1.8
Col4a1P02463 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col4a1P02463 Gm6139-201ENSMUST00000079261 882 ntBASIC26.29■■□□□ 1.8
Col4a1P02463 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC26.28■■□□□ 1.8
Col4a1P02463 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col4a1P02463 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col4a1P02463 Gm9870-201ENSMUST00000063874 645 ntBASIC26.28■■□□□ 1.8
Col4a1P02463 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col4a1P02463 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col4a1P02463 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.28■■□□□ 1.8
Col4a1P02463 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.27■■□□□ 1.8
Col4a1P02463 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Col4a1P02463 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
Col4a1P02463 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col4a1P02463 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Col4a1P02463 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col4a1P02463 Gm43137-201ENSMUST00000198052 594 ntBASIC26.27■■□□□ 1.8
Col4a1P02463 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Col4a1P02463 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.8
Col4a1P02463 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Col4a1P02463 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Col4a1P02463 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Col4a1P02463 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Col4a1P02463 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Col4a1P02463 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC26.25■■□□□ 1.79
Col4a1P02463 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
Col4a1P02463 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col4a1P02463 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC26.24■■□□□ 1.79
Col4a1P02463 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col4a1P02463 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
Col4a1P02463 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col4a1P02463 AC153962.1-201ENSMUST00000218530 1948 ntBASIC26.23■■□□□ 1.79
Col4a1P02463 Gm43017-201ENSMUST00000198296 752 ntBASIC26.22■■□□□ 1.79
Col4a1P02463 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col4a1P02463 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col4a1P02463 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Col4a1P02463 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Col4a1P02463 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col4a1P02463 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Col4a1P02463 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
Col4a1P02463 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Col4a1P02463 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col4a1P02463 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC26.19■■□□□ 1.78
Col4a1P02463 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Col4a1P02463 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col4a1P02463 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col4a1P02463 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Col4a1P02463 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC26.17■■□□□ 1.78
Col4a1P02463 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col4a1P02463 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
Col4a1P02463 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col4a1P02463 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col4a1P02463 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col4a1P02463 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col4a1P02463 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Col4a1P02463 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col4a1P02463 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Col4a1P02463 Slc35b2-207ENSMUST00000226086 850 ntBASIC26.15■■□□□ 1.78
Col4a1P02463 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col4a1P02463 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms