Protein–RNA interactions for Protein: P01735

T-cell receptor beta chain V region 86T1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01735 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.23■□□□□ 0.67
P01735 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.23■□□□□ 0.67
P01735 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01735 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01735 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
P01735 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01735 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01735 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P01735 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01735 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P01735 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01735 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01735 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
P01735 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01735 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01735 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01735 Gm13238-201ENSMUST00000117655 780 ntBASIC19.21■□□□□ 0.67
P01735 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01735 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.21■□□□□ 0.67
P01735 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01735 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01735 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
P01735 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01735 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01735 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P01735 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.2■□□□□ 0.66
P01735 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P01735 Gm45444-201ENSMUST00000211394 898 ntBASIC19.2■□□□□ 0.66
P01735 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01735 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01735 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
P01735 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
P01735 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01735 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01735 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01735 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.19■□□□□ 0.66
P01735 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01735 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01735 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01735 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01735 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01735 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.18■□□□□ 0.66
P01735 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.18■□□□□ 0.66
P01735 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.18■□□□□ 0.66
P01735 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
P01735 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01735 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P01735 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01735 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01735 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01735 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01735 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.18■□□□□ 0.66
P01735 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01735 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
P01735 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
P01735 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01735 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.17■□□□□ 0.66
P01735 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.17■□□□□ 0.66
P01735 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01735 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01735 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01735 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01735 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
P01735 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
P01735 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01735 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01735 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01735 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01735 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01735 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01735 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01735 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01735 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.15■□□□□ 0.66
P01735 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P01735 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01735 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01735 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
P01735 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01735 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P01735 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.14■□□□□ 0.65
P01735 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
P01735 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01735 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01735 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01735 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01735 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01735 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P01735 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
P01735 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
P01735 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01735 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01735 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
P01735 Gm5921-201ENSMUST00000075898 882 ntBASIC19.13■□□□□ 0.65
P01735 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01735 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01735 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.13■□□□□ 0.65
P01735 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01735 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01735 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P01735 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms