Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01643 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.65■□□□□ 0.26
P01643 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.65■□□□□ 0.26
P01643 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
P01643 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.65■□□□□ 0.26
P01643 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
P01643 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01643 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01643 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01643 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01643 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01643 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.64■□□□□ 0.25
P01643 Golgb1-201ENSMUST00000023534 498 ntBASIC16.64■□□□□ 0.25
P01643 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P01643 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P01643 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01643 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01643 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01643 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01643 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.63■□□□□ 0.25
P01643 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.63■□□□□ 0.25
P01643 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01643 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01643 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01643 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01643 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01643 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
P01643 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
P01643 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01643 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01643 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01643 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01643 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.62■□□□□ 0.25
P01643 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01643 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.62■□□□□ 0.25
P01643 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
P01643 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01643 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01643 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
P01643 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.61■□□□□ 0.25
P01643 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01643 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01643 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01643 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01643 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
P01643 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01643 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01643 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01643 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.6■□□□□ 0.25
P01643 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
P01643 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01643 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01643 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.59■□□□□ 0.25
P01643 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01643 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
P01643 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01643 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
P01643 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
P01643 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.59■□□□□ 0.25
P01643 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01643 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01643 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
P01643 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P01643 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P01643 Gm9870-201ENSMUST00000063874 645 ntBASIC16.58■□□□□ 0.24
P01643 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.58■□□□□ 0.24
P01643 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.58■□□□□ 0.24
P01643 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01643 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01643 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P01643 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01643 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P01643 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01643 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P01643 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.57■□□□□ 0.24
P01643 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.57■□□□□ 0.24
P01643 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01643 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P01643 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P01643 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
P01643 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P01643 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01643 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01643 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01643 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01643 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01643 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01643 Gm12821-201ENSMUST00000120022 600 ntBASIC16.56■□□□□ 0.24
P01643 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01643 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P01643 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
P01643 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.56■□□□□ 0.24
P01643 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01643 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01643 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01643 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.55■□□□□ 0.24
P01643 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01643 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
P01643 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01643 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 1207.3 ms