Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.74■■□□□ 1.07
Syn1O88935 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Syn1O88935 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Syn1O88935 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Syn1O88935 Gm10493-201ENSMUST00000097270 612 ntBASIC21.74■■□□□ 1.07
Syn1O88935 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Syn1O88935 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Syn1O88935 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.73■■□□□ 1.07
Syn1O88935 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.72■■□□□ 1.07
Syn1O88935 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Syn1O88935 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Syn1O88935 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Syn1O88935 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Syn1O88935 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Syn1O88935 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syn1O88935 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.71■■□□□ 1.07
Syn1O88935 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syn1O88935 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syn1O88935 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Syn1O88935 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Syn1O88935 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Syn1O88935 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Syn1O88935 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.7■■□□□ 1.06
Syn1O88935 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.7■■□□□ 1.06
Syn1O88935 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Syn1O88935 Gm43173-201ENSMUST00000202246 593 ntBASIC21.7■■□□□ 1.06
Syn1O88935 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.7■■□□□ 1.06
Syn1O88935 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syn1O88935 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syn1O88935 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syn1O88935 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Syn1O88935 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Syn1O88935 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Syn1O88935 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Syn1O88935 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Syn1O88935 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Syn1O88935 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Syn1O88935 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Syn1O88935 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.69■■□□□ 1.06
Syn1O88935 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Syn1O88935 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Syn1O88935 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Syn1O88935 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Syn1O88935 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Syn1O88935 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Syn1O88935 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Syn1O88935 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Syn1O88935 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Syn1O88935 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.67■■□□□ 1.06
Syn1O88935 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.67■■□□□ 1.06
Syn1O88935 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Syn1O88935 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Syn1O88935 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syn1O88935 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.66■■□□□ 1.06
Syn1O88935 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.66■■□□□ 1.06
Syn1O88935 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.66■■□□□ 1.06
Syn1O88935 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.66■■□□□ 1.06
Syn1O88935 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Syn1O88935 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Syn1O88935 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syn1O88935 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Syn1O88935 Gm10849-201ENSMUST00000100397 618 ntBASIC21.65■■□□□ 1.06
Syn1O88935 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Syn1O88935 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syn1O88935 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.65■■□□□ 1.06
Syn1O88935 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Syn1O88935 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Syn1O88935 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.64■■□□□ 1.05
Syn1O88935 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Syn1O88935 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.64■■□□□ 1.05
Syn1O88935 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syn1O88935 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syn1O88935 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.63■■□□□ 1.05
Syn1O88935 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Syn1O88935 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syn1O88935 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Syn1O88935 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.63■■□□□ 1.05
Syn1O88935 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
Syn1O88935 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Syn1O88935 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Syn1O88935 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Syn1O88935 Gm43060-201ENSMUST00000200621 289 ntBASIC21.62■■□□□ 1.05
Syn1O88935 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Syn1O88935 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Syn1O88935 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Syn1O88935 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.62■■□□□ 1.05
Syn1O88935 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Syn1O88935 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Syn1O88935 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.6■■□□□ 1.05
Syn1O88935 Gm26833-201ENSMUST00000180899 440 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms