Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hdac3O88895 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.59■□□□□ 0.57
Hdac3O88895 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac3O88895 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac3O88895 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac3O88895 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac3O88895 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac3O88895 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac3O88895 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac3O88895 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac3O88895 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac3O88895 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac3O88895 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac3O88895 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac3O88895 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac3O88895 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac3O88895 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hdac3O88895 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Hdac3O88895 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hdac3O88895 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Hdac3O88895 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac3O88895 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac3O88895 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.57■□□□□ 0.56
Hdac3O88895 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac3O88895 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac3O88895 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac3O88895 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac3O88895 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Hdac3O88895 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.56■□□□□ 0.56
Hdac3O88895 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Hdac3O88895 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hdac3O88895 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.55■□□□□ 0.56
Hdac3O88895 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac3O88895 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac3O88895 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hdac3O88895 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac3O88895 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac3O88895 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac3O88895 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hdac3O88895 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac3O88895 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac3O88895 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Hdac3O88895 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hdac3O88895 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hdac3O88895 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Hdac3O88895 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hdac3O88895 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac3O88895 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac3O88895 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.54■□□□□ 0.56
Hdac3O88895 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hdac3O88895 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Hdac3O88895 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac3O88895 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac3O88895 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac3O88895 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac3O88895 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac3O88895 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac3O88895 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hdac3O88895 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hdac3O88895 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hdac3O88895 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Hdac3O88895 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hdac3O88895 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hdac3O88895 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.52■□□□□ 0.56
Hdac3O88895 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.52■□□□□ 0.56
Hdac3O88895 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.52■□□□□ 0.56
Hdac3O88895 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Hdac3O88895 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hdac3O88895 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.51■□□□□ 0.55
Hdac3O88895 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.51■□□□□ 0.55
Hdac3O88895 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hdac3O88895 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hdac3O88895 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hdac3O88895 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.5■□□□□ 0.55
Hdac3O88895 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Hdac3O88895 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Hdac3O88895 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Hdac3O88895 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hdac3O88895 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hdac3O88895 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hdac3O88895 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Hdac3O88895 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac3O88895 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac3O88895 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac3O88895 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.49■□□□□ 0.55
Hdac3O88895 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac3O88895 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac3O88895 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac3O88895 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac3O88895 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.49■□□□□ 0.55
Hdac3O88895 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hdac3O88895 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac3O88895 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac3O88895 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac3O88895 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac3O88895 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hdac3O88895 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hdac3O88895 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Hdac3O88895 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hdac3O88895 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 121 ms