Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfi1bO70237 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfi1bO70237 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfi1bO70237 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfi1bO70237 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfi1bO70237 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfi1bO70237 Mir6538-201ENSMUST00000183713 110 ntBASIC17.32■□□□□ 0.36
Gfi1bO70237 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gfi1bO70237 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfi1bO70237 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gfi1bO70237 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.32■□□□□ 0.36
Gfi1bO70237 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gfi1bO70237 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gfi1bO70237 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gfi1bO70237 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gfi1bO70237 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gfi1bO70237 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gfi1bO70237 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Gfi1bO70237 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfi1bO70237 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfi1bO70237 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gfi1bO70237 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfi1bO70237 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gfi1bO70237 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gfi1bO70237 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfi1bO70237 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gfi1bO70237 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfi1bO70237 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.29■□□□□ 0.36
Gfi1bO70237 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gfi1bO70237 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.29■□□□□ 0.36
Gfi1bO70237 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.29■□□□□ 0.36
Gfi1bO70237 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gfi1bO70237 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Gfi1bO70237 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Gfi1bO70237 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfi1bO70237 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.28■□□□□ 0.36
Gfi1bO70237 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gfi1bO70237 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gfi1bO70237 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gfi1bO70237 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gfi1bO70237 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfi1bO70237 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfi1bO70237 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gfi1bO70237 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfi1bO70237 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfi1bO70237 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gfi1bO70237 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gfi1bO70237 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gfi1bO70237 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfi1bO70237 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfi1bO70237 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.27■□□□□ 0.36
Gfi1bO70237 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gfi1bO70237 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gfi1bO70237 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gfi1bO70237 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gfi1bO70237 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.26■□□□□ 0.35
Gfi1bO70237 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gfi1bO70237 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gfi1bO70237 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfi1bO70237 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.26■□□□□ 0.35
Gfi1bO70237 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfi1bO70237 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfi1bO70237 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gfi1bO70237 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Gfi1bO70237 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Gfi1bO70237 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Gfi1bO70237 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gfi1bO70237 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gfi1bO70237 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfi1bO70237 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfi1bO70237 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfi1bO70237 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfi1bO70237 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.25■□□□□ 0.35
Gfi1bO70237 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfi1bO70237 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gfi1bO70237 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfi1bO70237 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfi1bO70237 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gfi1bO70237 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gfi1bO70237 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms