Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
B020004C17RikJ3QP07 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
B020004C17RikJ3QP07 Gm8493-201ENSMUST00000196881 489 ntBASIC23.82■■□□□ 1.4
B020004C17RikJ3QP07 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
B020004C17RikJ3QP07 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
B020004C17RikJ3QP07 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
B020004C17RikJ3QP07 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.82■■□□□ 1.4
B020004C17RikJ3QP07 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
B020004C17RikJ3QP07 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
B020004C17RikJ3QP07 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
B020004C17RikJ3QP07 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.8■■□□□ 1.4
B020004C17RikJ3QP07 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
B020004C17RikJ3QP07 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
B020004C17RikJ3QP07 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
B020004C17RikJ3QP07 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.79■■□□□ 1.4
B020004C17RikJ3QP07 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.79■■□□□ 1.4
B020004C17RikJ3QP07 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.79■■□□□ 1.4
B020004C17RikJ3QP07 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
B020004C17RikJ3QP07 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
B020004C17RikJ3QP07 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
B020004C17RikJ3QP07 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
B020004C17RikJ3QP07 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
B020004C17RikJ3QP07 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
B020004C17RikJ3QP07 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
B020004C17RikJ3QP07 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
B020004C17RikJ3QP07 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
B020004C17RikJ3QP07 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
B020004C17RikJ3QP07 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
B020004C17RikJ3QP07 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
B020004C17RikJ3QP07 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
B020004C17RikJ3QP07 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
B020004C17RikJ3QP07 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
B020004C17RikJ3QP07 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
B020004C17RikJ3QP07 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
B020004C17RikJ3QP07 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
B020004C17RikJ3QP07 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
B020004C17RikJ3QP07 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
B020004C17RikJ3QP07 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
B020004C17RikJ3QP07 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
B020004C17RikJ3QP07 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
B020004C17RikJ3QP07 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
B020004C17RikJ3QP07 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
B020004C17RikJ3QP07 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
B020004C17RikJ3QP07 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
B020004C17RikJ3QP07 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.71■■□□□ 1.39
B020004C17RikJ3QP07 Gm43173-201ENSMUST00000202246 593 ntBASIC23.71■■□□□ 1.39
B020004C17RikJ3QP07 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
B020004C17RikJ3QP07 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.71■■□□□ 1.39
B020004C17RikJ3QP07 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
B020004C17RikJ3QP07 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
B020004C17RikJ3QP07 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
B020004C17RikJ3QP07 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
B020004C17RikJ3QP07 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
B020004C17RikJ3QP07 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
B020004C17RikJ3QP07 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
B020004C17RikJ3QP07 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
B020004C17RikJ3QP07 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
B020004C17RikJ3QP07 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
B020004C17RikJ3QP07 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
B020004C17RikJ3QP07 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
B020004C17RikJ3QP07 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
B020004C17RikJ3QP07 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
B020004C17RikJ3QP07 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
B020004C17RikJ3QP07 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.69■■□□□ 1.38
B020004C17RikJ3QP07 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.69■■□□□ 1.38
B020004C17RikJ3QP07 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
B020004C17RikJ3QP07 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
B020004C17RikJ3QP07 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
B020004C17RikJ3QP07 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
B020004C17RikJ3QP07 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
B020004C17RikJ3QP07 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
B020004C17RikJ3QP07 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
B020004C17RikJ3QP07 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
B020004C17RikJ3QP07 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
B020004C17RikJ3QP07 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
B020004C17RikJ3QP07 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
B020004C17RikJ3QP07 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
B020004C17RikJ3QP07 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms