Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc179J3QM76 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc179J3QM76 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc179J3QM76 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc179J3QM76 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc179J3QM76 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc179J3QM76 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc179J3QM76 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.18□□□□□ -0.3
Ccdc179J3QM76 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc179J3QM76 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc179J3QM76 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc179J3QM76 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc179J3QM76 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.16□□□□□ -0.3
Ccdc179J3QM76 AC117245.4-201ENSMUST00000217388 1646 ntBASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc179J3QM76 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc179J3QM76 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc179J3QM76 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc179J3QM76 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc179J3QM76 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc179J3QM76 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc179J3QM76 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc179J3QM76 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc179J3QM76 Gm6277-202ENSMUST00000224036 2779 ntBASIC13.12□□□□□ -0.31
Ccdc179J3QM76 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc179J3QM76 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc179J3QM76 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc179J3QM76 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms